Published 2013 | Version v1
Dataset Open

Vibrio harveyi

  • 1. ROR icon California Institute of Technology
Researcher:
Jung, Kirsten

Citation

Description

wild type Vibrio harveyi BB120

Files

keyimg_aba2013-12-24-16.jpg
Files (25.3 MB)
Name Size
md5:8bcdb8f90f29650779a348cfcd62435b
24.3 MB Download
md5:6482ac4a677094af658dd24962d75170
1.1 MB Preview Download

Technical info

Tilt Series Date: 2013-12-24

Data Taken By: Ariane Briegel

Species / Specimen: Vibrio harveyi

Strain:

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 27500x.

Acquisition Software: UCSFTomo

Upload Method: reupload_downloaded

Processing Software Used: SIRT

Collaborators and Roles: Kirsten Jung

Purification / Growth Conditions / Treatment: grown in ab medium

External Files

Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-12-24-16

BB120VibrioHWT0016.mrc, Tilt Series (Pixel Size 0.39 nm), 3.4 GB Download

BB120VibrioHWT0016SIRTrot.rec, Reconstruction (Pixel Size 0.0 nm), 6.8 GB Download

aba2013-12-24-16_slicer19195.png, soft REZ (a reduction of ribosomes) in the interior of the cell. (compare to the ribosome density near the cell periphery (top and bottom Z slices) -andrew, 828.4 kB Download

aba2013-12-24-16_slicer19196.png, ribosome density near the bottom boundary of the cell is higher than deep in the cell interior (z-slice near the bottom of the cell) -andrew, 803.6 kB Download

aba2013-12-24-16_slicer19197.png, ribosome density near the top boundary of the cell is higher than deep in the cell interior (z-slice near the top of the cell) -andrew, 738.5 kB Download

Additional details

Created:
May 22, 2023
Modified:
May 22, 2023