Published 2020 | Version v1
Dataset Open

Ecoli_EPEC_8612

  • 1. ROR icon California Institute of Technology

Description

These are E coli cells (EPEC 8612) obtained from Ritesh (Ilan Rosenshine lab at the Hebrew . university). The idea is to image bacterial nanotubes in these cells.

Technical info

Tilt Series Date: 2020-02-09

Data Taken By: Mohammed Kaplan

Species / Specimen: Escherichia coli

Strain: 8612, EPEC Δrof1-escLΔrof3-mpcΔescN-espFΔflhBAΔfliOPQRΔminCD

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Ų, defocus: -8.0 μm, magnification: 19500x.

Microscope: Caltech Titan Krios

Acquisition Software: Serial EM

Upload Method: pipeline

Processing Software Used: None

Collaborators and Roles: These cells were prepared with Ritesh in Ilan Rosenshine lab at the Hebrew University.

Purification / Growth Conditions / Treatment: The cells were incubated on grids on agar plates (DMEM agar plates for three hours) and then . on starvation medium agar plate for 1 hour Then washed with PBS and blotted and then plunge . frozen. Yuxi helped in sample preparation and data collection

Sample Preparation: The cells were incubated on grids on agar plates (DMEM agar plates for three hours) and then . on starvation medium agar plate for 1 hour

Attached Files

EPEC_8612_tilt42.mrc, Tilt Series (Pixel Size 0.449 nm), 448.6 MB

EPEC_8612_tilt42.mrc.mdoc, 8.1 kB

Files

keyimg_mka2020-02-09-21.jpg

Files (462.0 MB)

Name Size
448.6 MB (external) Download
8.1 kB (external) Download
md5:67b5c7501f971b2a59e8f601db0b3bee
13.4 MB Preview Download

Additional details

Identifiers

DOI
10.22002/0d8ns-nqz45
TILT_SERIES_ID
mka2020-02-09-21

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2020-02-09
Created
2020-02-10
Updated
2022-10-05