Published 2017 | Version v1
Dataset Open

Thermococcus kodakarensis-cold

  • 1. ROR icon California Institute of Technology

Description

Imaging Thermococcus koakarensis flagella and cones

Technical info

Tilt Series Date: 2017-01-13

Data Taken By: Debnath Ghosal

Species / Specimen: Thermococcus kodakarensis

Strain:

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1.50°, constant angular increment, dosage: 140.0 eV/Ų, defocus: -8.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Strain sent to us by Robert Gunsalus, UCLA. Data collected and processed by Ki Woo and Debnath Ghosal

Purification / Growth Conditions / Treatment: Storing in a cold room for 2 months

Sample Preparation: Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 3.5 sec. Wait time 8 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.

Attached Files

Tkcoldroom-a0003.mrc, Tilt Series (Pixel Size 0.39 nm), 2.3 GB

Files

keyimg_dga2017-01-13-3.jpg

Files (2.3 GB)

Name Size
md5:ef79cfcd99dbd83db39dd8197f8f3a9f
16.9 MB Preview Download
2.3 GB (external) Download

Additional details

Identifiers

DOI
10.22002/12fbr-xsv53
TILT_SERIES_ID
dga2017-01-13-3

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2017-01-13
Created
2017-01-13
Updated
2017-01-17