Published 2015 | Version v1
Dataset Open

Myxococcus xanthus delta-pomXYZ

Creators

  • 1. ROR icon California Institute of Technology

Contributors

Description

Grid box YWC123(sent to Janelia)With Volta phase plate (-2 um defocus)

Technical info

Tilt Series Date: 2015-05-01

Data Taken By: Yi-Wei Chang

Species / Specimen: Myxococcus xanthus

Strain:

Tilt Series Settings: Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Ų, defocus: -2.0 μm, magnification: 26000x.

Microscope: Janelia Titan

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Strain form Lotte Sogaard-Andersen

Purification / Growth Conditions / Treatment: 10ml cells into 100ml fresh CTT at 30C shaking for 2 days. Resuspend cells with pipet to break up clumps. Spun down 100ml culture in SS-34 rotor for 10 minutes at 5,000rcf. Discard pellet. Spin supernatant for 15 minutes at 30,000rcf.

Sample Preparation: Vitrobot (MK vi) settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 2 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.

Attached Files

YWC123-A-tomo0002.mrc, Tilt Series (Pixel Size 0.42 nm), 3.6 GB

YWC123-A-tomo0002_part131_6.rec, Reconstruction (Pixel Size 1.68 nm), 516.7 MB

Files

keyimg_ycw2015-05-01-3.jpg

Files (4.1 GB)

Name Size
md5:a366c798635d993a11017597d7a4ad58
1.0 MB Preview Download
md5:6bab137b8f20e2ebbdd65bb615760b3a
19.8 MB Preview Download
3.6 GB (external) Download
516.7 MB (external) Download

Additional details

Identifiers

DOI
10.22002/1c6ay-xgz09
TILT_SERIES_ID
ycw2015-05-01-3

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2015-05-01
Created
2015-05-04
Updated
2015-05-27