Published 2013 | Version v1
Dataset Open

Vibrio cholerae MKW1383

Creators

  • 1. ROR icon California Institute of Technology

Description

In the mixture with Bdellovibrio for 16 hr at 30C.

Technical info

Tilt Series Date: 2013-11-06

Data Taken By: Yi-Wei Chang

Species / Specimen: Vibrio cholerae

Strain: 2740-80

Tilt Series Settings: Single Axis, tilt range: (-50.0°, 50.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Ų, defocus: -10.0 μm, magnification: 26000x.

Microscope: Janelia Titan

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Cells prepared by Lee Rettberg

Purification / Growth Conditions / Treatment: Bdellovibrio cells grown in S17-1 prey solution at 30 degrees, OD600=0.2, filtered by 0.22 um filter, concentrated, mixed with overnight Vibrio cholarea MKW1383 for 16 hr at 30 C before freezing

Sample Preparation: Vitrobot settings: 100% humidity, 3µl sample, 10 nm BSA treated gold. -3 offset, 4 sec blot time, no drain. Ethane/propane mix. Quantifoil Cu R2/2 200 grid

ycw2013-11-06-6_slicer6484.jpg: Flagellar motor ycw2013-11-06-6_slicer6486.jpg: Chemoreceptor ycw2013-11-06-6_slicer6489.jpg: Chemoreceptor ycw2013-11-06-6_slicer6490.jpg: Peptidoglycan ycw2013-11-06-6_slicer6493.jpg: Vesicle ycw2013-11-06-6_slicer6494.jpg: Vesicle

Attached Files

01-montage_7x70004.mrc, Tilt Series (Pixel Size 0.42 nm), 2.8 GB

01-montage_7x70004_full.rec, Reconstruction (Pixel Size 1.68 nm), 688.9 MB

Files

keyimg_ycw2013-11-06-6.jpg

Files (3.5 GB)

Name Size
2.8 GB (external) Download
688.9 MB (external) Download
md5:297d0268ec09102c67ba26a0e3d006ce
1.0 MB Preview Download
md5:8fb218a27a56eb67f87f3e26422836d4
23.4 MB Preview Download
md5:022aca567dea117cdf663ed7a837229b
316.4 kB Preview Download
md5:a80e271597a02eb8abbf6c4d426e46d5
235.9 kB Preview Download
md5:84a81547f932becb29a769d07211eac8
229.9 kB Preview Download
md5:d901430565f7435435c049e579147544
264.6 kB Preview Download
md5:33c3a8d22b6dd44acc62ad82c33db380
114.3 kB Preview Download
md5:4d546cf2ec8f6c2c2e710db8bbce2014
115.7 kB Preview Download

Additional details

Identifiers

DOI
10.22002/1zjj4-dqr48
TILT_SERIES_ID
ycw2013-11-06-6

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2013-11-06
Created
2013-11-08
Updated
2014-07-14