Legionella KS79 (WT), 42 C_On
Description
Technical info
<strong>Tilt Series Date:</strong> 2019-05-28</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-51.0°, 51.0°), step: 3.0°, constant angular increment, dosage: 100.0 eV/Ų, defocus: -6.0 μm, magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Howard Shuman (University of Chicago). Data collected by Debnath Ghosal and Yuxi Liu.</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 3 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.</p>
External Files
Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-28-191/rawdata/</p>HS001A-area2-tomo0016.mrc, Tilt Series (Pixel Size 0.26 nm), 996.7 MB<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-28-191/rawdata/HS001A-area2-tomo0016.mrc" > <i class="download icon"></i> Download </a>
</p> HS001A-area2-tomo0016_full.rec, Reconstruction (Pixel Size 1.04 nm), 445.4 MB<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-28-191/3dimage_103951/HS001A-area2-tomo0016_full.rec" > <i class="download icon"></i> Download </a>
</p>Files
keyimg_dga2019-05-28-191.jpg
Additional details
Identifiers
- DOI
- 10.22002/2sx1z-h0g15
- TILT_SERIES_ID
- dga2019-05-28-191
Funding
- NIH
- HHMI
- Beckman Institute
- Gordon and Betty Moore Foundation
- Agouron Institute
- John Templeton Foundation
Dates
- Collected
-
2019-05-28
- Created
-
2019-06-04
- Updated
-
2019-06-05