Published 2016 | Version v1
Dataset Open

Oil well Actinobacterium

Creators

  • 1. ROR icon California Institute of Technology

Description

Grid box YWC208

Technical info

Tilt Series Date: 2016-04-12

Data Taken By: Yi-Wei Chang

Species / Specimen: Unspecified

Strain: None

Tilt Series Settings: Single Axis, tilt range: (-50.0°, 50.0°), step: 2.0°, constant angular increment, dosage: 125.0 eV/Ų, defocus: -10.0 μm, magnification: 22500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Fixed cells received from Meng Wang/ Xiao-Lei Wu Lab at Peking University, China

Purification / Growth Conditions / Treatment: Firstly wash cells using PBS for 3 times, then add proper volum of 2.5% glutaraldehyde followed 1 hour room temp incubation (done in Peking), then send to Caltech for freezing.

Sample Preparation: Vitrobot (MK iv) settings: 100% humidity, 4µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 4 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.

ycw2016-04-12-39_slicer16850.jpg: Material in the tip of thick tube

Attached Files

20160412_YWC210_30003.mrc, Tilt Series (Pixel Size 0.48 nm), 1.5 GB

20160412_YWC210_30003_full.rec, Reconstruction (Pixel Size 1.92 nm), 712.7 MB

Files

keyimg_ycw2016-04-12-39.jpg

Files (2.2 GB)

Name Size
1.5 GB (external) Download
712.7 MB (external) Download
md5:73a7d9a7d0d88dd391714f0ccb51a7b4
1.0 MB Preview Download
md5:3da2c246747ffff81c2440d9afc4f6c1
20.8 MB Preview Download
md5:591e58efdb50b86735960672195064f1
317.0 kB Preview Download

Additional details

Identifiers

DOI
10.22002/405kn-tnm02
TILT_SERIES_ID
ycw2016-04-12-39

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2016-04-12
Created
2016-04-13
Updated
2016-04-26