Published 2019 | Version v1
Dataset Open

Helicobacter_pylori_dFliG

  • 1. ROR icon California Institute of Technology

Contributors

Researcher:

Description

These are H. pylori cells that don't have a complete FliP. In addition, FliG was knocked out in . these cells. The aim is to study the assembly of the flagellar motor and the core complex.

Technical info

Tilt Series Date: 2019-09-24

Data Taken By: Mohammed Kaplan

Species / Specimen: Helicobacter pylori

Strain: 26695

Tilt Series Settings: Single Axis, tilt range: (-50.0°, 50.0°), step: 2°, constant angular increment, dosage: 130.0 eV/Ų, defocus: -8.0 μm, magnification: 19500x.

Microscope: Caltech Titan Krios

Acquisition Software: Serial EM

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: I received these cells from Carrie Schaffer from the university of Kentucky. These are wild . type cells but they don't express complete FliP protein. Therefore, they don't assemble full . flagella. We knocked out Flip protein of the flagellar motor to study the early assembly states . of flagellar motor.

Purification / Growth Conditions / Treatment: I grew the cells on blood agar plates from -80 stock at 37C with 5% CO2. the cells were grown . for 48 hours and then spread on a new plate with a cotton swab and left to grow for 24 hours. . The grids were prepared from both batches (48 hours, and 24 hours, separately).

Sample Preparation: The samples were prepared with Vitrobot IV. Blotting conditions were either: blot force 6, blot . time 3, drain time 1 OR blot force -3, blot time 4, drain time 1. 100% humidity. Cu grids. 10 nm . gold.

Attached Files

Hpylori_dFliG38_Good.mrc, Tilt Series (Pixel Size 0.4494 nm), 2.4 GB

Hpylori_dFliG38_Good_full.rec, Reconstruction (Pixel Size 1.7976 nm), 737.3 MB

Files

keyimg_mka2019-09-24-48.jpg

Files (3.1 GB)

Name Size
2.4 GB (external) Download
737.3 MB (external) Download
md5:91770871b24de5831b3bdf7c280f59a7
1.7 MB Preview Download
md5:6c6541edf228c8274bfaf46bc53fd6ae
6.0 MB Preview Download

Additional details

Identifiers

DOI
10.22002/4838p-2kk41
TILT_SERIES_ID
mka2019-09-24-48

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2019-09-24
Created
2019-09-26
Updated
2019-10-31