equivalence_paper_data.zip
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7.4 kB
P093_all_grads_eigs_resc.pdf
7.4 kB
P093_all_grads_raw.pdf
5.5 kB
P093_all_grads_resc.pdf
5.5 kB
P093_all_rims_eigs_raw.pdf
23.3 kB
P093_all_rims_eigs_resc.pdf
23.4 kB
P093_all_rims_grads_raw.pdf
25.7 kB
P093_all_rims_grads_resc.pdf
25.7 kB
P093_expt_info
P093_fcs_files.xlsx
35.0 kB
P093_heatmap_alldata_raw.pdf
90.1 kB
P093_heatmap_alldata_resc.pdf
91.6 kB
P093_process_background.png
221.6 kB
P093_process_cell_count.png
97.5 kB
P093_process_rescaling.png
305.2 kB
P093_process_rescaling_cv.png
106.5 kB
P093_process_scaling_factors.png
59.5 kB
P093_raw_data
P094_acvr1_shrna_k6_all_rims
.DS_Store
6.1 kB
P094.efl
10.2 MB
P094_all_grads_eigs_raw.pdf
8.9 kB
P094_all_grads_eigs_resc.pdf
7.7 kB
P094_all_grads_raw.pdf
6.7 kB
P094_all_grads_resc.pdf
5.8 kB
P094_all_rims_eigs_raw.pdf
33.3 kB
P094_all_rims_eigs_resc.pdf
22.7 kB
P094_all_rims_grads_raw.pdf
34.3 kB
P094_all_rims_grads_resc.pdf
24.7 kB
P094_expt_info
P094_fcs_files.xlsx
35.0 kB
P094_heatmap_alldata_raw.pdf
91.2 kB
P094_heatmap_alldata_resc.pdf
91.6 kB
P094_process_background.png
222.9 kB
P094_process_cell_count.png
98.4 kB
P094_process_rescaling.png
305.1 kB
P094_process_rescaling_cv.png
102.1 kB
P094_process_scaling_factors.png
55.4 kB
P094_raw_data
acvr1_shrna_k6_params.xlsx
27.3 kB
P095_acvr1_shrna_k6_all_rims
P096_acvr1_shrna_k6_all_rims
P098_k6_some_matrices
P099_k6_some_matrices
P101_b6_all_rims
RP050_d1_shrna_br2_control_rims
.DS_Store
6.1 kB
Backup
RP050.efl
1.3 MB
RP050_all_grads_BMPR2 shRNA 2A_raw.pdf
4.6 kB
RP050_all_grads_BMPR2 shRNA 2A_resc.pdf
4.2 kB
RP050_all_grads_BMPR2 siRNA_raw.pdf
4.4 kB
RP050_all_grads_BMPR2 siRNA_resc.pdf
4.3 kB
RP050_all_grads_D1_raw.pdf
4.3 kB
RP050_all_grads_D1_resc.pdf
4.3 kB
RP050_all_grads_Non-targeting shRNA_raw.pdf
4.4 kB
RP050_all_grads_Non-targeting shRNA_resc.pdf
4.5 kB
RP050_all_grads_eigs_BMPR2 shRNA 2A_raw.pdf
5.2 kB
RP050_all_grads_eigs_BMPR2 shRNA 2A_resc.pdf
4.7 kB
RP050_all_grads_eigs_BMPR2 siRNA_raw.pdf
4.9 kB
RP050_all_grads_eigs_BMPR2 siRNA_resc.pdf
4.9 kB
RP050_all_grads_eigs_D1_raw.pdf
4.9 kB
RP050_all_grads_eigs_D1_resc.pdf
4.9 kB
RP050_all_grads_eigs_Non-targeting shRNA_raw.pdf
5.0 kB
RP050_all_grads_eigs_Non-targeting shRNA_resc.pdf
5.0 kB
RP050_all_rims_eigs_BMPR2 shRNA 2A_raw.pdf
7.2 kB
RP050_all_rims_eigs_BMPR2 shRNA 2A_resc.pdf
6.5 kB
RP050_all_rims_eigs_BMPR2 siRNA_raw.pdf
6.9 kB
RP050_all_rims_eigs_BMPR2 siRNA_resc.pdf
7.3 kB
RP050_all_rims_eigs_D1_raw.pdf
6.7 kB
RP050_all_rims_eigs_D1_resc.pdf
6.8 kB
RP050_all_rims_eigs_Non-targeting shRNA_raw.pdf
6.8 kB
RP050_all_rims_eigs_Non-targeting shRNA_resc.pdf
7.0 kB
RP050_all_rims_grads_BMPR2 shRNA 2A_raw.pdf
7.9 kB
RP050_all_rims_grads_BMPR2 shRNA 2A_resc.pdf
7.1 kB
RP050_all_rims_grads_BMPR2 siRNA_raw.pdf
7.4 kB
RP050_all_rims_grads_BMPR2 siRNA_resc.pdf
7.8 kB
RP050_all_rims_grads_D1_raw.pdf
7.4 kB
RP050_all_rims_grads_D1_resc.pdf
7.4 kB
RP050_all_rims_grads_Non-targeting shRNA_raw.pdf
7.4 kB
RP050_all_rims_grads_Non-targeting shRNA_resc.pdf
7.6 kB
RP050_cp_bmp4_response.png
42.6 kB
RP050_expt_info
RP050_fcs_files.xlsx
29.2 kB
RP050_process_background.png
82.9 kB
RP050_process_cell_count.png
101.8 kB
RP050_process_rescaling.png
246.7 kB
RP050_process_rescaling_cv.png
86.6 kB
RP050_process_scaling_factors.png
54.8 kB
RP050_raw_data
RP050_rim_comparison_plot_1.pdf
6.6 kB
RP050_rim_comparison_plot_2.pdf
6.6 kB
RP057_shrna_acvr1_bmpr1a_minimal_rims
.DS_Store
6.1 kB
RP057.efl
6.8 MB
RP057_acvr1_kd_effect_on_bmp9.jpg
36.0 kB
RP057_all_grads_ACVR1 shRNA 123A_raw.pdf
4.3 kB
RP057_all_grads_ACVR1 shRNA 123A_resc.pdf
4.5 kB
RP057_all_grads_AVCR1 siRNA_raw.pdf
4.3 kB
RP057_all_grads_AVCR1 siRNA_resc.pdf
4.3 kB
RP057_all_grads_BMPR1A shRNA 3C_raw.pdf
4.2 kB
RP057_all_grads_BMPR1A shRNA 3C_resc.pdf
4.2 kB
RP057_all_grads_BMPR1A siRNA_raw.pdf
4.2 kB
RP057_all_grads_BMPR1A siRNA_resc.pdf
4.2 kB
RP057_all_grads_D1_raw.pdf
4.3 kB
RP057_all_grads_D1_resc.pdf
4.3 kB
RP057_all_grads_eigs_ACVR1 shRNA 123A_raw.pdf
4.8 kB
RP057_all_grads_eigs_ACVR1 shRNA 123A_resc.pdf
5.1 kB
RP057_all_grads_eigs_AVCR1 siRNA_raw.pdf
4.9 kB
RP057_all_grads_eigs_AVCR1 siRNA_resc.pdf
4.8 kB
RP057_all_grads_eigs_BMPR1A shRNA 3C_raw.pdf
4.8 kB
RP057_all_grads_eigs_BMPR1A shRNA 3C_resc.pdf
4.7 kB
RP057_all_grads_eigs_BMPR1A siRNA_raw.pdf
4.8 kB
RP057_all_grads_eigs_BMPR1A siRNA_resc.pdf
4.8 kB
RP057_all_grads_eigs_D1_raw.pdf
4.8 kB
RP057_all_grads_eigs_D1_resc.pdf
4.8 kB
RP057_all_rims_eigs_ACVR1 shRNA 123A_raw.pdf
7.4 kB
RP057_all_rims_eigs_ACVR1 shRNA 123A_resc.pdf
7.2 kB
RP057_all_rims_eigs_AVCR1 siRNA_raw.pdf
6.8 kB
RP057_all_rims_eigs_AVCR1 siRNA_resc.pdf
7.0 kB
RP057_all_rims_eigs_BMPR1A shRNA 3C_raw.pdf
7.2 kB
RP057_all_rims_eigs_BMPR1A shRNA 3C_resc.pdf
7.2 kB
RP057_all_rims_eigs_BMPR1A siRNA_raw.pdf
7.2 kB
RP057_all_rims_eigs_BMPR1A siRNA_resc.pdf
7.1 kB
RP057_all_rims_eigs_D1_raw.pdf
7.3 kB
RP057_all_rims_eigs_D1_resc.pdf
7.4 kB
RP057_all_rims_grads_ACVR1 shRNA 123A_raw.pdf
8.0 kB
RP057_all_rims_grads_ACVR1 shRNA 123A_resc.pdf
7.8 kB
RP057_all_rims_grads_AVCR1 siRNA_raw.pdf
7.4 kB
RP057_all_rims_grads_AVCR1 siRNA_resc.pdf
7.6 kB
RP057_all_rims_grads_BMPR1A shRNA 3C_raw.pdf
7.8 kB
RP057_all_rims_grads_BMPR1A shRNA 3C_resc.pdf
7.8 kB
RP057_all_rims_grads_BMPR1A siRNA_raw.pdf
7.7 kB
RP057_all_rims_grads_BMPR1A siRNA_resc.pdf
7.6 kB
RP057_all_rims_grads_D1_raw.pdf
7.9 kB
RP057_all_rims_grads_D1_resc.pdf
8.0 kB
RP057_expt_info
RP057_heatmap_alldata_ACVR1 shRNA 123A_raw.pdf
86.2 kB
RP057_heatmap_alldata_ACVR1 shRNA 123A_resc.pdf
84.7 kB
RP057_heatmap_alldata_AVCR1 siRNA_raw.pdf
85.1 kB
RP057_heatmap_alldata_AVCR1 siRNA_resc.pdf
84.5 kB
RP057_heatmap_alldata_BMPR1A shRNA 3C_raw.pdf
54.7 kB
RP057_heatmap_alldata_BMPR1A shRNA 3C_resc.pdf
58.2 kB
RP057_heatmap_alldata_BMPR1A siRNA_raw.pdf
52.5 kB
RP057_heatmap_alldata_BMPR1A siRNA_resc.pdf
51.3 kB
RP057_heatmap_alldata_D1_raw.pdf
80.3 kB
RP057_heatmap_alldata_D1_resc.pdf
84.8 kB
RP057_process_background.png
71.6 kB
RP057_process_cell_count.png
101.7 kB
RP057_process_rescaling.png
258.1 kB
RP057_process_rescaling_cv.png
83.8 kB
RP057_process_scaling_factors.png
56.8 kB
RP057_raw_data
RP057_raw_data_by_condition.jpg
32.0 kB
RP057_rim_comparison_plot_1.pdf
8.4 kB
RP057_rim_comparison_plot_2.pdf
8.4 kB
RP057_rim_comparison_plot_3.pdf
6.6 kB
RP057_rim_comparison_plot_4.pdf
6.7 kB
RP057_rim_comparison_plot_5.pdf
8.4 kB
RP066
qpcr_data
.DS_Store
8.2 kB
RP018_qPCR_R1bOX_PC_MC
RP023_alk1ox_mc
RP045_JML_HK_qPCR_bmpr2_shRNA
RP056_shRNA_ACVR1_BMPR1A_qPCR
RP067_shRNA_ACVR1_BMPR1A_qPCR
rnaseq_data
ARCHS
sequences
theory_data
.ipynb_checkpoints
PF026_onestep_all_cell_lines_parameters_BMP4_BMP7_BMP9_BMP10_GDF5_20210312_1726.pkl
982.1 MB
PF026_onestep_all_cell_lines_parameters_BMP4_BMP7_BMP9_BMP10_GDF5_20210312_1747.pkl
982.1 MB
PF026_onestep_all_cell_lines_parameters_BMP4_BMP7_BMP9_BMP10_GDF5_20210312_1752.pkl
982.1 MB