Published 2013 | Version v1
Dataset Open

Vibrio cholerae MKW1383

Creators

  • 1. ROR icon California Institute of Technology

Description

In the mixture with Bdellovibrio for 16 hr at 30C.

Technical info

Tilt Series Date: 2013-11-06

Data Taken By: Yi-Wei Chang

Species / Specimen: Vibrio cholerae

Strain: 2740-80

Tilt Series Settings: Single Axis, tilt range: (-50.0°, 50.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Ų, defocus: -10.0 μm, magnification: 26000x.

Microscope: Janelia Titan

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Cells prepared by Lee Rettberg

Purification / Growth Conditions / Treatment: Bdellovibrio cells grown in S17-1 prey solution at 30 degrees, OD600=0.2, filtered by 0.22 um filter, concentrated, mixed with overnight Vibrio cholarea MKW1383 for 16 hr at 30 C before freezing

Sample Preparation: Vitrobot settings: 100% humidity, 3µl sample, 10 nm BSA treated gold. -3 offset, 4 sec blot time, no drain. Ethane/propane mix. Quantifoil Cu R2/2 200 grid

ycw2013-11-06-8_slicer6321.jpg: chemoreceptor . peptidoglycan ycw2013-11-06-8_slicer6324.jpg: filament ycw2013-11-06-8_slicer6326.jpg: filament ycw2013-11-06-8_slicer6328.jpg: filament

Attached Files

01-montage_7x70022.mrc, Tilt Series (Pixel Size 0.42 nm), 2.8 GB

01-montage_7x70022_part101_10.rec, Reconstruction (Pixel Size 1.68 nm), 688.9 MB

Files

keyimg_ycw2013-11-06-8.jpg

Files (3.5 GB)

Name Size
2.8 GB (external) Download
688.9 MB (external) Download
md5:753c9ca0d6b6964a268117bca79e4cee
1.0 MB Preview Download
md5:17f56d47abcdec318607926f842e0426
22.9 MB Preview Download
md5:436030ac3161a055504811f41619a57d
381.7 kB Preview Download
md5:ac2c0835d8585531ee7fd2a0ee6a30c3
293.9 kB Preview Download
md5:73225b80a520eedd69dc0af7122e0bec
298.6 kB Preview Download
md5:c1558780d5332015dbd8a1424af0c85b
357.9 kB Preview Download

Additional details

Identifiers

DOI
10.22002/593tn-xp036
TILT_SERIES_ID
ycw2013-11-06-8

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2013-11-06
Created
2013-11-08
Updated
2014-07-14