Published 2013 | Version v1
Dataset Open

Bdellovibrio attack-phase

Creators

  • 1. ROR icon California Institute of Technology

Description

In the mixture with Vibrio cholerae for 16 hr at 30C.

Technical info

Tilt Series Date: 2013-11-06

Data Taken By: Yi-Wei Chang

Species / Specimen: Bdellovibrio bacteriovorus

Strain: HD100

Tilt Series Settings: Single Axis, tilt range: (-50.0°, 50.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Ų, defocus: -10.0 μm, magnification: 26000x.

Microscope: Janelia Titan

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Cells prepared by Lee Rettberg

Purification / Growth Conditions / Treatment: Bdellovibrio cells grown in S17-1 prey solution at 30 degrees, OD600=0.2, filtered by 0.22 um filter, concentrated, mixed with overnight Vibrio cholarea MKW1383 for 16 hr at 30 C before freezing

Sample Preparation: Vitrobot settings: 100% humidity, 3µl sample, 10 nm BSA treated gold. -3 offset, 4 sec blot time, no drain. Ethane/propane mix. Quantifoil Cu R2/2 200 grid

ycw2013-11-06-26_slicer7984.jpg: Bdellovibrio bacteriovorus . nucleoid ycw2013-11-06-26_slicer7985.jpg: Bdellovibrio bacteriovorus . chemoreceptor ycw2013-11-06-26_slicer7986.jpg: Bdellovibrio bacteriovorus . budding vesicle . flagellum ycw2013-11-06-26_slicer7988.jpg: Bdellovibrio bacteriovorus . extracellular granule? ycw2013-11-06-26_slicer7992.jpg: Bdellovibrio bacteriovorus tube (11 nm)

Attached Files

01-montage_7x70015.mrc, Tilt Series (Pixel Size 0.42 nm), 2.8 GB

01-montage_7x70015_full.rec, Reconstruction (Pixel Size 1.68 nm), 688.9 MB

Files

keyimg_ycw2013-11-06-26.jpg

Files (3.5 GB)

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Additional details

Identifiers

DOI
10.22002/5apka-xbh06
TILT_SERIES_ID
ycw2013-11-06-26

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2013-11-06
Created
2013-11-08
Updated
2014-07-22