CombinatorialAddressing.zip
CombinatorialAddressing
Code
promisys
__init__.py
0 Bytes
bmp.py
24.3 kB
combinatorial_addressing.py
1.1 kB
mutual_information.py
9.5 kB
utilities.py
36.2 kB
setup.py
125 Bytes
Data
Figure2-3_one-to-one.pkl
562.9 kB
Figure2-3_orthogonal-addressing.pkl
43.6 MB
Figure4_subset-addressing.pkl
25.5 kB
Figure5_BMP2-BMP9.csv
147.7 kB
Figure5_BMP9-BMP10.csv
93.4 kB
Figure6_generative-model.pkl
544.4 kB
Figure6_lattice-sampling.pkl
17.1 MB
FigureS5_4-level-optimization.pkl
108.9 MB
FigureS6_parameter-fit.csv
1.9 kB
FigureS6_random-sampling.npz
8.9 MB
Figures
Figure2B.pdf
948.9 kB
Figure2C.pdf
544.7 kB
Figure2D.pdf
569.0 kB
Figure2D_schemes.pdf
20.3 kB
Figure3ABCEFG.pdf
565.8 kB
Figure3C_ROC.pdf
544.9 kB
Figure3D.pdf
545.1 kB
Figure3H.pdf
545.5 kB
Figure3I.pdf
573.0 kB
Figure4B.pdf
545.3 kB
Figure4C.pdf
544.7 kB
Figure4C_repertoires.pdf
26.4 kB
Figure5A.pdf
1.1 MB
Figure5AD_colorbar.pdf
543.2 kB
Figure5B.pdf
545.7 kB
Figure5C.pdf
544.7 kB
Figure5D.pdf
1.1 MB
Figure5E.pdf
544.2 kB
Figure5F.pdf
544.5 kB
Figure6A.pdf
12.7 kB
Figure6A_colorbar.pdf
543.2 kB
Figure6B.pdf
543.7 kB
Figure6C.pdf
544.9 kB
Figure6D_responses.pdf
565.8 kB
Figure6D_thresholded.pdf
1.0 MB
Figure6E_responses.pdf
578.3 kB
Figure6E_thresholded.pdf
1.0 MB
Figure6F.pdf
550.2 kB
Figure6G.pdf
544.3 kB
Figure6H.pdf
544.0 kB
Figure6K.pdf
543.6 kB
FigureS1.pdf
554.3 kB
FigureS1_colorbar.pdf
543.1 kB
FigureS2.pdf
874.8 kB
FigureS3A.pdf
560.5 kB
FigureS3B.pdf
601.8 kB
FigureS4A.pdf
546.4 kB
FigureS4B.pdf
546.3 kB
FigureS4C.pdf
545.4 kB
FigureS4D.pdf
547.5 kB
FigureS4E.pdf
546.2 kB
FigureS4F.pdf
545.7 kB
FigureS5ABEF.pdf
559.3 kB
FigureS5C.pdf
545.1 kB
FigureS5D.pdf
560.1 kB
FigureS5G.pdf
545.5 kB
FigureS5H.pdf
573.5 kB
FigureS6A.pdf
543.7 kB
FigureS6B.pdf
549.6 kB
GraphicalAbstract.pdf
571.7 kB
README.md
2.0 kB
Scripts
AllFigures.ipynb
1.0 MB
Figure2_Approach.ipynb
101.4 kB
Figure3,S3_OrthogonalAddressing.ipynb
182.8 kB
Figure4_SubsetAddressing.ipynb
49.9 kB
Figure5_ExperimentalAddressing.ipynb
128.1 kB
Figure6_InformationTheory.ipynb
139.9 kB
FigureS1_ResponseArchetypes.ipynb
21.1 kB
FigureS2_ThreeChannel.ipynb
166.2 kB
FigureS4_DistinguishabilityThreshold.ipynb
101.8 kB
FigureS5_LigandDiscretization.ipynb
110.8 kB
FigureS6_InformationTheory.ipynb
38.5 kB