Published 2017 | Version v1
Dataset Open

H. pylori 26695 WT / AGS

Creators

  • 1. ROR icon California Institute of Technology

Description

Grid box YWC243

Technical info

Tilt Series Date: 2017-02-27

Data Taken By: Yi-Wei Chang

Species / Specimen: Helicobacter pylori

Strain: 26695

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 2.0°, constant angular increment, dosage: 180.0 eV/Ų, defocus: -6.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Strain and sample prepared by Carrie Shaffer

Sample Preparation: Vitrobot settings: 100% humidity, 37 C, 3µl BSA treated 10 nm gold (100 ml gold+ 25 ml 10% BSA x4, resuspend in 30 ul). Blot for 5 sec (1 sec longer than usual to remove more solution). Ethane/propane mix.

ycw2017-02-27-75_slicer17822.jpg: detached tube ycw2017-02-27-75_slicer17823.jpg: detached tube ycw2017-02-27-75_slicer17824.jpg: detached tube

Attached Files

20170227_YWC243_20051.mrc, Tilt Series (Pixel Size 0.39 nm), 1.7 GB

20170227_YWC243_20051_full.rec, Reconstruction (Pixel Size 1.56 nm), 534.5 MB

Files

keyimg_ycw2017-02-27-75.jpg

Files (2.3 GB)

Name Size
1.7 GB (external) Download
534.5 MB (external) Download
md5:3e2cf136e9fcdfa7e088ffbc3fdefd91
1.1 MB Preview Download
md5:930d2ad7ea296055c87b39a729bfaa82
17.9 MB Preview Download
md5:ea2d96e591b17c03b26822f40342f006
371.9 kB Preview Download
md5:6194eb6a851d6122a3bbda4cc6930ecc
364.5 kB Preview Download
md5:364a0e68134c246854d6af2b3e5f4c21
373.1 kB Preview Download

Additional details

Identifiers

DOI
10.22002/5y12g-cy093
TILT_SERIES_ID
ycw2017-02-27-75

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2017-02-27
Created
2017-03-01
Updated
2017-03-03