Published 2015 | Version v1
Dataset Open

V. cholerae CF59 - ∆tcpB pMT5

Creators

  • 1. ROR icon California Institute of Technology

Description

Classical strain with ctxA deletion.Minor pilin tcpB knockout.Cell harbors pMT5 plasmid (inducible toxT).

Technical info

Tilt Series Date: 2015-06-17

Data Taken By: Yi-Wei Chang

Species / Specimen: Vibrio cholerae

Strain: O395-N1

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Ų, defocus: -6.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Strain from Ronald K. Taylor

Purification / Growth Conditions / Treatment: ON cultures of Vibrio cholerae O395 NI pMT5 grown in LB pH 6.5, 1 mM IPTG and 100 ug/mL ampicilin

Sample Preparation: Vitrobot (MK iv) settings: 100% humidity, 4µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 2.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.

Attached Files

20150617_AK08_10015.mrc, Tilt Series (Pixel Size 0.39 nm), 3.4 GB

20150617_AK08_10015.rec, Reconstruction (Pixel Size 1.56 nm), 1.1 GB

Files

keyimg_ycw2015-06-17-15.jpg

Files (4.5 GB)

Name Size
3.4 GB (external) Download
1.1 GB (external) Download
md5:971abff10c465ea17ff75fc7d5d3dfd7
878.5 kB Preview Download
md5:a4efefc90dc4eda47fc110547088bf82
18.8 MB Preview Download

Additional details

Identifiers

DOI
10.22002/7c898-js933
TILT_SERIES_ID
ycw2015-06-17-15

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2015-06-17
Created
2015-06-17
Updated
2015-07-13