Caltech Tomography Archive
Published 2019 | Version v1
Dataset Open

Escherichia coli

Kaplan, Mohammed1
  • 1. ROR icon California Institute of Technology

Description

These cells were treated with a laser before plunge freezing. This project was done in collaboration with Aguinaldo (a dentist from Brazil). Ultimately, this work was published in photo diagnosis and photodynamic therapy journal.

Files

keyimg_mka2019-01-13-3.jpg
Files (17.6 MB)
Name Size
keymov_mka2019-01-13-3.mp4
md5:f52a6237e58190d88dc3085521714637
16.5 MB Download
keyimg_mka2019-01-13-3.jpg
md5:0939014849183e1914632403d263cf86
1.0 MB Preview Download

Technical info

Tilt Series Date: 2019-01-13

Data Taken By: Mohammed Kaplan

Species / Specimen: Escherichia coli

Strain: WM3433, ΔminCDE mreB-A125V (minicell producing)

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Ų, defocus: -9.0 μm, magnification: 26000x.

Acquisition Software: SerialEM

Upload Method: pipeline

Processing Software Used: Raptor

External Files

Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-01-13-3/rawdata/

Ecoli_Penicillin2.mrc, Tilt Series (Pixel Size 0.53 nm), 1.7 GB Download

Ecoli_Penicillin2_full.rec, Reconstruction (Pixel Size 2.12 nm), 445.4 MB Download

Additional details

Identifiers Funding Dates
Created:
June 5, 2023
Modified:
August 26, 2025