Published 2019 | Version v1
Dataset Open

JV9082_K3_janelia

  • 1. ROR icon California Institute of Technology

Description

JV9082:DotF-sfGFP fusion

Technical info

Tilt Series Date: 2019-12-05

Data Taken By: Debnath Ghosal

Species / Specimen: Legionella pneumophila

Strain: Philadelphia-1_Lp02

Tilt Series Settings: Single Axis, tilt range: (-54.0°, 54.0°), step: 3.0°, constant angular increment, dosage: 90.0 eV/Ų, defocus: -4.0 μm, magnification: 26000x.

Microscope: Janelia Titan

Acquisition Software: SerialEM

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Strain sent to us by Joseph P. Vogel, Washington University School of Medicine. Data collected and processed by Debnath Ghosal.

Purification / Growth Conditions / Treatment: Cells were grown in AYE liquid culture with following supplements: ferric nitrate, cysteine hydrochloride and thymidine.

Sample Preparation: Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 4.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Data collected at Janelia Krios (K3 camera). Mag: 26000, pixel size: 2.61A. Defocus range -2 to -4 um.

Attached Files

9082_Box2_grid3_72.mrc, Tilt Series (Pixel Size 0.261 nm), 1.7 GB

9082_Box2_grid3_72_full.rec, Reconstruction (Pixel Size 1.044 nm), 737.3 MB

Files

keyimg_dga2019-12-05-55.jpg

Files (2.5 GB)

Name Size
1.7 GB (external) Download
737.3 MB (external) Download
md5:f7ba660872b2209441e8eeddf5f6317c
1.8 MB Preview Download
md5:28b47aac679ef7a1c8a63c8e9cffcb3e
7.2 MB Preview Download

Additional details

Identifiers

DOI
10.22002/7r0bb-b9j14
TILT_SERIES_ID
dga2019-12-05-55

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2019-12-05
Created
2020-07-05
Updated
2020-07-07