FPKM values computed from RNA-seq measurements of single cells taken from developing forelimbs of C57BL/6 mice

Creators: He, Peng¹; Williams, Brian A.¹; Marinov, Georgi K.²; Trout, Diane¹; Amrhein, Henry¹; Pennacchio, Len A.³; Dickel, Diane E.³; Visel, Axel³; Ren, Bing⁴; Zhang, Yu⁵; Wold, Barbara¹

1. California Institute of Technology
2. Department of Genetics, Stanford University, Palo Alto, CA 94305
3. Lawrence Berkeley National Laboratory, Berkeley, California, USA
4. Department of Cellular and Molecular Medicine, UC San Diego, La Jolla, CA
5. Department of Statistics, Pennsylvania State University, University Park, PA

Description

This table displays FPKM values computed from RNA-seq measurements of single cells taken from developing forelimbs of C57BL/6 mice. The reads were aligned with STAR version 2.5.2a and quantifications made using RSEM version 1.2.15 We used index files provided by www.encodeproject.org. For STAR we used index files from ENCFF483PAE, and RSEM index files ENCFF064YNQ, which were built from male mm10, the GENCODE M4 comprehensive set with tRNAs and ERCC spike ins which all available from ENCFF533JRE.

FPKM values computed from RNA-seq measurements of single cells taken from developing forelimbs of C57BL/6 mice

Description

Additional details