Published 2018 | Version v1
Dataset Open

Shewanella oneidensis MR-1

  • 1. ROR icon California Institute of Technology

Description

Raw data files of Shewanella oneidensis MR-1

Files

keyimg_mka2018-05-22-16.jpg
Files (3.4 MB)
Name Size
md5:72b878912b6c81a5263e5d97e6ffe10c
3.4 MB Preview Download

Technical info

Tilt Series Date: 2018-05-22

Data Taken By: Mohammed Kaplan

Species / Specimen: Shewanella oneidensis

Strain: MR-1

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Ų, defocus: -8.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: Serial EM

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Cells were prepared in chemostat (2 days) by Sahand from Moh's group in USC.

Purification / Growth Conditions / Treatment: These are fixed cells prepared in chemostat (2 days). Poorna has prepared these grids but they were not good (only few cells present per grid). I imaged them on the Polara to check if they have "iron cores" so that I send them to Sharon in Weizmann Institute.

External Files

Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-05-22-16/rawdata/

tgtanchor.mrc, Tilt Series (Pixel Size 0.57 nm), 198.9 MB Download

Additional details

Created:
June 7, 2023
Modified:
August 29, 2025