Published 2015 | Version v1
Dataset Open

wt_perfusion_fixed

  • 1. ROR icon California Institute of Technology

Description

Raw data files of wt_perfusion_fixed

Technical info

Tilt Series Date: 2015-09-19

Data Taken By: Poorna Subramanian

Species / Specimen: Shewanella oneidensis

Strain: MR-1

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 135.0 eV/Ų, defocus: -10.0 μm, magnification: 41000x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: The cells look good on scope. Next time use 1.5ul gold.

Collaborators and Roles: Moh and Sahand USC

Purification / Growth Conditions / Treatment: This sample is wt cells grown in perfusion set-up. It is fixed with 2.5% glutaraldehyde for 15 minutes. The grid was prepared by Sahand on 9/10/15. The grid was triple rinsed in distilled water and saved in distilled water until freezing on 9/15/15 at USC using manual plunger.

Sample Preparation: This is gold grid with honey C. The grid was pulled out quickly from media. 1.2ul of 10nm gold was added immediately to the cells on the C side -same side as cells were present. The grid was loaded on manual plunger and blotted from behind- opposite of C side. And then plunge frozen.

Attached Files

091915_perfusionwtfixed_sq70009_part121_29.rec, Reconstruction (Pixel Size 1.04 nm), 445.4 MB

091915_perfusionwtfixed_sq70009.mrc, Tilt Series (Pixel Size 0.26 nm), 3.4 GB

Files

keyimg_psa2015-09-19-9.jpg

Files (3.9 GB)

Name Size
3.4 GB (external) Download
445.4 MB (external) Download
md5:b4392d13c1e89af141ec492ce8f8a71a
1.1 MB Preview Download
md5:5e5dd4b0b9118f855526e61e3720d5f7
12.6 MB Preview Download

Additional details

Identifiers

DOI
10.22002/a6knc-23m31
TILT_SERIES_ID
psa2015-09-19-9

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2015-09-19
Created
2015-09-19
Updated
2015-10-28