Published November 14, 2019
| Version 1.0
Dataset
Open
Highly Multiplexed single-cell RNA-seq by DNA oligonucleotide tagging of cellular proteins
Description
This directory contains sequencing data in fastq format for three scRNA-seq experiments found in Gehring et al. "Highly Multiplexed single-cell RNA-seq by DNA oligonucleotide tagging of cellular proteins" (Nat. Biotech.). A four-sample proof-of-concept experiment, an 8-sample Limits of Multiplexing (LoM) experiment, and a 96-sample growth factor titration. The files can be processed with single-cell RNA-seq software such as kallisto. We provide Google Colab notebooks that download and process the data to more compressed data formats.
Files
ClickTagWhitelist.csv
Files
(314.5 GB)
| Name | Size | Actions |
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md5:89559bfa7448bbaa7c076b7fdb8009cb
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223.3 MB | Download |
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md5:da35e9af2c37aa2fa8f79c6917515969
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441.9 MB | Download |
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md5:4e5a6334744fe618f599349d0cf4fc76
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498 Bytes | Preview Download |
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md5:2725b70f64c0e4b17d2b1fece2718403
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1.6 GB | Download |
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md5:ce7aef6f5766a7dfad9f1904a0abc548
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158.9 MB | Download |
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md5:2cc101384d2c7ea08bb4ca92be210d68
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510.5 MB | Download |
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md5:c5b5e692529d53d2ea2ba8c3490acffc
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20.0 MB | Download |
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md5:797a4b17e5a3d31b39e8e91e3e886bba
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1.6 GB | Download |
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md5:7f53bd1c430f422be9e7011e7efa7cbb
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1.4 GB | Download |
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md5:b701c26b07dab50b5afd6f18ccbe3134
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16.0 MB | Download |
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md5:6ea4cf82686a48f17019d2e3680ce446
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64.5 MB | Download |
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md5:ba79579ddf551a8f7e0a117a8302bff2
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46.9 MB | Download |
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md5:bdd60a4985747f23b7304c82f2291485
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196.7 MB | Download |
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md5:1a7d198bd4c62c32647daabc0ac4d434
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2.2 GB | Download |
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md5:d1909840fd6347fa3c0f1b63c60b4325
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1.2 GB | Download |
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md5:bbd6ee41206c77f13b73ec822afee1c0
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1.1 GB | Download |
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md5:571fea3ced73332825ee58dcf76a9d7c
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1.2 GB | Download |
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md5:516035ad1aa865b1e7336380715c484f
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4.5 MB | Download |
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md5:382b30e0dc3f8b3ae7d2a2f8d97a3844
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144.2 MB | Download |
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md5:86886701f7ef7e12a83853997ffa86d1
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75.6 MB | Download |
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md5:a63ac6e35244660d0ad72d474e8666f0
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48.0 GB | Download |
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md5:d64bba42827da597a539cc2f1da2f460
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755.5 MB | Download |
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md5:436cb8a0ed57b65a01460c99378ae070
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339.3 MB | Download |
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md5:6cff8053a83d335271990eb3144ab48c
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2.4 GB | Download |
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md5:15e6186bb49ba42f5aac019ed1e295c4
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4.3 GB | Download |
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md5:5373a30c5a8ea0514c1625618639a0e4
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1.4 GB | Download |
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md5:e57f72960e6ec8509db9c32a9493fc70
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3.1 GB | Download |
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md5:483f405441abd8550742e56358f74611
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18.7 GB | Download |
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md5:f042489e72d940b6535b6df40485d301
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2.5 GB | Download |
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md5:feffc2c9f54ef4f79d0023891df8d9ed
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19.9 GB | Download |
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md5:3ed3c6018be4590883f6a20645c75539
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1.4 GB | Download |
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md5:d05c4f727ad3f28991bc04912aa93206
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187.3 MB | Download |
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md5:0f9287e11329c06a66c4df2b30a53475
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19.5 GB | Download |
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md5:972906b5bbc14953b942dbdcceb9f32a
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21.0 GB | Download |
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md5:c1c076b9cc93d105e96b7a99197f9209
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2.2 GB | Download |
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md5:f4a5a3b215d178e1857b293609926491
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103.5 MB | Download |
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md5:86b7ba29662725e3a74c6ed8fd125820
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18.2 GB | Download |
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md5:fd165d8b6c621769d526e2bf478eb06e
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20.6 GB | Download |
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md5:827a221de1cf0b630f0bf051ae046edc
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370.2 MB | Download |
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md5:0a2bd1c294ed2106de4a029fda622657
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187.5 MB | Download |
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md5:2d6626f63b80295914264271b76e98c3
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2.5 GB | Download |
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md5:2f5265d043ff4f86e9b6b63df44baffa
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181.3 MB | Download |
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md5:843ab12c12dc2dd9dc0845418c5c939f
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70.5 MB | Download |
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md5:66f64935723185e0aec65db9a0268aab
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2.1 GB | Download |
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md5:f4eda7bb4a698a13c9ac94562cc3e6dd
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2.3 GB | Download |
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md5:8359285876fc917a0b3199747496519b
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232.6 MB | Download |
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md5:d9090c9103246f824af2783a052d959b
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3.7 GB | Download |
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md5:9eed10fbbe623ff9c2c2b659ca6815b6
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54.4 GB | Download |
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md5:ba399f20611a5887526bff3d95915ae2
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2.3 GB | Download |
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md5:3ed073f18a72eedd161fe827e3a7f4d0
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140.4 MB | Download |
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md5:f64e68e2037b52a9d32407456af23482
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954.1 MB | Download |
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md5:55fff2a305c4e97972e4070b581e99ba
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1.1 GB | Download |
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md5:e7648f12ffabaefbf0eaf06eb6477fd1
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158.9 MB | Download |
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md5:e63b0af75642ca9f452a3a128cdec7f3
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181.0 MB | Download |
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md5:5da512f611ca31e121c3092b528348fa
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318.8 MB | Download |
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md5:a55025e07cfac10e00842e230498dcb4
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17.4 GB | Download |
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md5:10b3eaf7af88e2d2d4d739d9624e54d0
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4.2 GB | Download |
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md5:b0c16d132f847406e9984cbd864b8d91
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3.0 GB | Download |
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md5:e924fb3b73553ef8bfdac93f8cdd8b15
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747.2 MB | Download |
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md5:e36963e87143bde471e6b3a0ec2d066d
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19.5 GB | Download |
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md5:890dc01b54192a2eefebd062abb9f752
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379 Bytes | Preview Download |
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md5:20de55a56aeea212ea0faa999236186b
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146.3 MB | Download |
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md5:d1b5da094dfa252832d2131a6138d3d4
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1.3 GB | Download |
Additional details
- CALTECHDATA_ID
- 1311