Published January 22, 2020 | Version 1.0
Dataset Open

ECCITE-seq protein and mRNA counts

Gorin, Gennady1 ORCID icon
Svensson, Valentine1 ORCID icon
Pachter, Lior1 ORCID icon
  • 1. ROR icon California Institute of Technology

Citation

Gorin, G., Svensson, V., & Pachter, L. (2020). ECCITE-seq protein and mRNA counts (1.0) [Data set]. CaltechDATA. https://doi.org/10.22002/D1.1342

Description

Protein data were acquired from https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM3596101, file GSM3596101_CTCL-ADT-count.csv.gz. velocyto processing: velocyto run (bam directory)/(BAM file).bam (transcriptome directory)/genes/genes.gtf

Files

GSM3596096_ctrl-ADT-count.csv
Files (78.8 MB)
Name Size
190426_CTCL.loom
md5:7ab86e77fb5c6204f5845adfd2afc3e4
39.4 MB Download
190426_ctrl.loom
md5:860584164c06f7bcd36a32e896cfcde0
37.5 MB Download
GSM3596096_ctrl-ADT-count.csv
md5:09f68ebd21b8e4d01c3953129a207ab1
952.4 kB Preview Download
GSM3596101_CTCL-ADT-count.csv
md5:98b68164a74e50b488b5f131f2f4a748
945.3 kB Preview Download

Additional details

Identifiers
Created:
September 8, 2022
Modified:
November 18, 2022