Caltech Tomography Archive
Published 2006 | Version v1
Dataset Open

HSV tomogram data

Gan, Lu1
  • 1. ROR icon California Institute of Technology
Researchers:
Ferland, Paulette
Bearer, Elaine
Gan, Lu

Description

Herpes Simplex Virus 1 .

Files

keyimg_lga2006-10-13-6.jpg
Files (2.6 MB)
Name Size
keymov_lga2006-10-13-6.mp4
md5:aede12757e5fef16d6ba4d2651f58d11
2.5 MB Download
keyimg_lga2006-10-13-6.jpg
md5:f5144ffb55df25ea1cd74c571d8fe7f5
85.1 kB Preview Download

Technical info

Tilt Series Date: 2006-10-13

Data Taken By: Lu Gan

Species / Specimen: Herpes Simplex Virus

Strain: HSV1

Tilt Series Settings: Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 100.0 eV/Ų, defocus: -4.0 μm, magnification: 0x.

Acquisition Software: UCSF tomo

Upload Method: rundir

Processing Software Used: imod, bsoft

Collaborators and Roles: Purified by Paulette Ferland in Elaine Bearer's lab at Brown. . Data collected by Lu Gan. . Processed by Lu Gan

Purification / Growth Conditions / Treatment: HSV-1 isolated from Vero cells. . Purified by 3x freeze-thaw. .

Sample Preparation: Quantioil R1.3/1.2, treated 10 nm gold with 5% BSA, 100% humidity,

External Files

Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2006-10-13-6/rawdata/

HSV11.mrc, Tilt Series (Pixel Size 0.56 nm), 1.1 GB Download

HSV11.rec, Reconstruction (Pixel Size 1.12 nm), 24.2 MB Download

Additional details

Identifiers Funding Dates
Created:
May 17, 2023
Modified:
August 27, 2025