Published 2013 | Version v1
Dataset Open

Vibrio cholerae MKW1383

Creators

  • 1. ROR icon California Institute of Technology

Description

In the mixture with Bdellovibrio for 16 hr at 30C.

Technical info

Tilt Series Date: 2013-11-06

Data Taken By: Yi-Wei Chang

Species / Specimen: Vibrio cholerae

Strain: 2740-80

Tilt Series Settings: Single Axis, tilt range: (-50.0°, 50.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Ų, defocus: -10.0 μm, magnification: 26000x.

Microscope: Janelia Titan

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Cells prepared by Lee Rettberg

Purification / Growth Conditions / Treatment: Bdellovibrio cells grown in S17-1 prey solution at 30 degrees, OD600=0.2, filtered by 0.22 um filter, concentrated, mixed with overnight Vibrio cholarea MKW1383 for 16 hr at 30 C before freezing

Sample Preparation: Vitrobot settings: 100% humidity, 3µl sample, 10 nm BSA treated gold. -3 offset, 4 sec blot time, no drain. Ethane/propane mix. Quantifoil Cu R2/2 200 grid

ycw2013-11-06-18_slicer6537.jpg: chemoreceptor ycw2013-11-06-18_slicer6538.jpg: filament ycw2013-11-06-18_slicer6540.jpg: filament ycw2013-11-06-18_slicer6541.jpg: filament

Attached Files

01-montage_7x70007.mrc, Tilt Series (Pixel Size 0.42 nm), 2.8 GB

01-montage_7x70007_full.rec, Reconstruction (Pixel Size 1.68 nm), 688.9 MB

Files

keyimg_ycw2013-11-06-18.jpg

Files (3.5 GB)

Name Size
2.8 GB (external) Download
688.9 MB (external) Download
md5:091bc2ee42f77f347832f697583bffa5
1.0 MB Preview Download
md5:55984726d1b7a4210f7189a3cf45d55e
23.2 MB Preview Download
md5:26b5f824103b30f6d2f28eb2d92db11a
404.6 kB Preview Download
md5:268efd1c63334e74c6ad4d9b0cce5415
289.5 kB Preview Download
md5:283ab0b93c2cee84a36f796ef50bdaf7
392.6 kB Preview Download
md5:0929aa616ab0ae81b160fadbff21dce1
325.6 kB Preview Download

Additional details

Identifiers

DOI
10.22002/b75nb-5r392
TILT_SERIES_ID
ycw2013-11-06-18

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2013-11-06
Created
2013-11-08
Updated
2014-07-14