Published 2013 | Version v1
Dataset Open

H. pylori 26695 / Hs.746T

Creators

  • 1. ROR icon California Institute of Technology

Contributors

Researcher:

Description

Grid box YWC046

Technical info

Tilt Series Date: 2013-11-04

Data Taken By: Yi-Wei Chang

Species / Specimen: Helicobacter pylori

Strain: 26695

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 190.0 eV/Ų, defocus: -10.0 μm, magnification: 22500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Cell prepared by Lee Rettberg.

Purification / Growth Conditions / Treatment: Cells grown in BLBB + 10% heat inactivated fetal bovine serum at 37 degrees + 5% CO2 for 4 days, OD600=0.4.Hs.746T cells cultivated on QF Au finder grid for 1 day. Infect by pylori for 4 hr.

Sample Preparation: Vitrobot settings: 100% humidity, 37 C, 3µl BSA treated gold (100 ul gold resuspent in 30 ul). Manual blot by Whatman 1 filter paper. Ethane/propane mix.

Attached Files

20131104_YWC046_10015.mrc, Tilt Series (Pixel Size 0.48 nm), 3.4 GB

20131104_YWC046_10015_full.rec, Reconstruction (Pixel Size 1.92 nm), 712.7 MB

Files

keyimg_ycw2013-11-04-15.jpg

Files (4.2 GB)

Name Size
3.4 GB (external) Download
712.7 MB (external) Download
md5:5025010adae7a4051e9ccc18ea881b9d
1.0 MB Preview Download
md5:d5d483cb4b36a992b9bc70a4108c6de8
22.8 MB Preview Download

Additional details

Identifiers

DOI
10.22002/bpx1c-qyz51
TILT_SERIES_ID
ycw2013-11-04-15

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2013-11-04
Created
2013-11-05
Updated
2013-11-08