Published April 30, 2023 | Version 1
Dataset Open

Protein sequences and IQ-TREE files for select gene families highlighted in "The genomic and cellular basis of biosynthetic innovation in rove beetles"

Parker, Joseph1 ORCID icon
Kitchen, Sheila ORCID icon
  • 1. ROR icon California Institute of Technology
Data collector:
Parker, Joseph1 ORCID icon
Data curator:
Kitchen, Sheila1 ORCID icon
  • 1. ROR icon California Institute of Technology

Citation

Parker, J., & Kitchen, S. (2023). Protein sequences and IQ-TREE files for select gene families highlighted in "The genomic and cellular basis of biosynthetic innovation in rove beetles" (Version 1) [Data set]. CaltechDATA. https://doi.org/10.22002/cgsw0-9kk67

Description

This dataset contains the curated protein sequences and raw tree files constructed with IQ-TREE. Gene families include fatty acid synthase (MFASN), very long chain fatty acid coa bubblegum ligase (VLFABGM), copper-transporting ATPase (CU_ATPase), esterases (est), fatty acyl-CoA reductase (FAR), steryol-CoA, cytochrome P450 4g (CYP), laccases (dmd), farnesyl pyrophosphate synthase (FFPS), geranylgeranyl diphosphate synthase (GGPS), isopentenyl diphosphate isomerase (IDI), and ubiquinone biosynthesis O-methyltransferase, mitochondrial (meos).

Files

Files (1.6 MB)
Name Size
alignments_trees_rove_beetlev2.tar.gz
md5:cdf035c05b246bd0d69a46cd744ce3e3
1.6 MB Download

Additional details

Dates
Created:
April 30, 2023
Modified:
April 30, 2023