Published 2018 | Version v1
Dataset Open

Shewanella oneidensis MR-1

  • 1. ROR icon California Institute of Technology

Contributors

Description

Raw data files of Shewanella oneidensis MR-1

Technical info

Tilt Series Date: 2018-05-22

Data Taken By: Mohammed Kaplan

Species / Specimen: Shewanella oneidensis

Strain: MR-1

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 150.0 eV/Ų, defocus: -8.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: Serial EM

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Cells were prepared in chemostat (2 days) by Sahand from Moh's group in USC.

Purification / Growth Conditions / Treatment: These are fixed cells prepared in chemostat (2 days). Poorna has prepared these grids but they were not good (only few cells present per grid). I imaged them on the Polara to check if they have "iron cores" so that I send them to Sharon in Weizmann Institute.

Attached Files

tilt7.mrc, Tilt Series (Pixel Size 0.39 nm), 1.4 GB

Files

keyimg_mka2018-05-22-8.jpg

Files (1.5 GB)

Name Size
md5:55a513370e73946beac79ae1d11f65e7
6.0 MB Preview Download
1.4 GB (external) Download

Additional details

Identifiers

DOI
10.22002/ebs12-bzr22
TILT_SERIES_ID
mka2018-05-22-8

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2018-05-22
Created
2018-05-22
Updated
2018-08-11