Published 2015 | Version v1
Dataset Open

V. cholerae RT4236 (stationary)

Creators

  • 1. ROR icon California Institute of Technology

Description

Classical strain with ctxA deletion.Cell harbors pMT5 plasmid (inducible toxT).

Technical info

Tilt Series Date: 2015-04-09

Data Taken By: Yi-Wei Chang

Species / Specimen: Vibrio cholerae

Strain: O395-N1

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Ų, defocus: -6.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: reupload_downloaded

Processing Software Used: SIRT

Collaborators and Roles: Strain from Ronald K. Taylor

Purification / Growth Conditions / Treatment: ON cultures of Vibrio cholerae O395 NI pMT5 grown in LB pH 6.5, 1 mM IPTG and 100 ug/mL ampicilin

Sample Preparation: Vitrobot (MK iv) settings: 100% humidity, 4µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 2.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.

Attached Files

20150409_AK005_10020_SIRT_2k.rec, Reconstruction (Pixel Size 0.0 nm), 5.7 GB

20150409_AK005_10020.mrc, Tilt Series (Pixel Size 0.39 nm), 3.4 GB

Files

keyimg_ycw2015-04-09-20.jpg

Files (9.2 GB)

Name Size
3.4 GB (external) Download
5.7 GB (external) Download
md5:2350ca15536ac166cdd767735a5a5bce
3.9 MB Preview Download
md5:061cea7e870d01af3a57ef0b89803643
11.4 MB Preview Download

Additional details

Identifiers

DOI
10.22002/ekdya-hda60
TILT_SERIES_ID
ycw2015-04-09-20

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2015-04-09
Created
2015-04-10
Updated
2015-04-29