Published 2019 | Version v1
Dataset Open

Hpylori_dFliM

  • 1. ROR icon California Institute of Technology

Contributors

Researcher:

Description

These are fast tilt series that I collected on Hpylori_dFliM (dFliP also) on the Titan Krios.

Technical info

Tilt Series Date: 2019-11-24

Data Taken By: Mohammed Kaplan

Species / Specimen: Helicobacter pylori

Strain: 26695

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 120.0 eV/Ų, defocus: -8.0 μm, magnification: 19500x.

Microscope: Caltech Titan Krios

Acquisition Software: Serial EM

Upload Method: pipeline

Processing Software Used: None

Collaborators and Roles: I received these cells from Carrie Schaffer from the university of Kentucky. These are wild type cells but they don't express complete FliP . protein. Therefore, they don't assemble full flagella. We knocked out FliM protein of the flagellar motor to study the early assembly states of . flagellar motor.

Purification / Growth Conditions / Treatment: I grew the cells on blood agar plates from -80 stock at 37C with 5% CO2. the cells were grown for 48 hours and then spread on a new plate with a cotton swab and left to . grow for 24 hours. The grids were prepared from both batches (48 hours, and 24 hours, separately).

Sample Preparation: The samples were prepared with Vitrobot IV. Blotting conditions were either: blot force 6, blot time 3, drain time 1 OR blot force -3, blot time 4, drain time 1, 100% . humidity. Cu grids. 10 nm gold.

Attached Files

Hpylori_dfliM_058_af.mrc, Tilt Series (Pixel Size 0.449 nm), 1.9 GB

Files

keyimg_mka2019-11-24-21.jpg

Files (1.9 GB)

Name Size
1.9 GB (external) Download
md5:86a6e8dd90d0702ea602afbbe97e4ac9
9.0 MB Preview Download

Additional details

Identifiers

DOI
10.22002/emztb-v8m92
TILT_SERIES_ID
mka2019-11-24-21

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2019-11-24
Created
2019-12-23
Updated
2022-09-29