Published 2013 | Version v1
Dataset Open

Hylemonella + Bdellovibrio

Creators

  • 1. ROR icon California Institute of Technology

Description

Raw data files of Hylemonella + Bdellovibrio

Technical info

Tilt Series Date: 2013-01-03

Data Taken By: Yi-Wei Chang

Species / Specimen: Hylemonella gracilis

Strain: ATCC 19624

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 100.0 eV/Ų, defocus: -10.0 μm, magnification: 27500x.

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: UCSFTomo

Purification / Growth Conditions / Treatment: Hylemonella grown 48 hr in Broth 233 at 26°C without antibiotics, Final OD600 < 0.1, incubated with attack-phase Bdellovibrio for 3 days, Spun down by 1000 rcf for 5 min and concentrated by ~10x for plunge freezing

Sample Preparation: Vitrobot setting: 100% humidity, 4 ul sample, 10 nm BSA treated gold, -3 offset, 4 s blot time, no drain, ethane/propane mix

ycw2013-01-03-23_slicer6043.jpg: membrane irregularity . flagellar motor ycw2013-01-03-23_slicer6044.jpg: unknown filament ycw2013-01-03-23_slicer6045.jpg: nucleoid . unknown filaments

Attached Files

Bdel_Hyle_0020011.mrc, Tilt Series (Pixel Size 0.4 nm), 2.3 GB

Bdel_Hyle_0020011_full.rec, Reconstruction (Pixel Size 1.6 nm), 441.7 MB

Files

keyimg_ycw2013-01-03-23.jpg

Files (2.8 GB)

Name Size
2.3 GB (external) Download
441.7 MB (external) Download
md5:724b57958b62ff9b46958a3eaa693eed
1.1 MB Preview Download
md5:9e7b1d4224154e740708ac4b66b20d2d
18.2 MB Preview Download
md5:15e48d46a350d5b08b8052ab0c2d9f23
405.5 kB Preview Download
md5:48a1b446c75299f6b46e4311cdaef527
322.4 kB Preview Download
md5:ee883cd791a36a51e54557e69dee9d5d
356.4 kB Preview Download

Additional details

Identifiers

DOI
10.22002/eygxt-8ta81
TILT_SERIES_ID
ycw2013-01-03-23

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2013-01-03
Created
2013-01-04
Updated
2014-07-11