markusmeister_Rosenberg-2021-Repository-1.0.1.zip
markusmeister-Rosenberg-2021-Repository-9bac88c
.DS_Store
10.2 kB
.gitattributes
66 Bytes
.ipynb_checkpoints
Maze_Analysis_2B-checkpoint.ipynb
4.7 MB
Maze_Analysis_3A-checkpoint.ipynb
1.0 MB
Maze_Analysis_3B-checkpoint.ipynb
8.3 MB
Maze_Analysis_3C-checkpoint.ipynb
2.7 MB
Maze_Analysis_3D-checkpoint.ipynb
2.0 MB
Maze_Analysis_3E-checkpoint.ipynb
1.8 MB
Maze_Analysis_3E_cb-checkpoint.ipynb
1.9 MB
LICENSE
1.1 kB
Maze_Analysis_2B.ipynb
4.7 MB
Maze_Analysis_3A.ipynb
1.0 MB
Maze_Analysis_3B.ipynb
141.9 kB
Maze_Analysis_3C.ipynb
2.4 MB
Maze_Analysis_3D.ipynb
2.0 MB
Maze_Analysis_3E.ipynb
1.8 MB
ReadMe.md
2.9 kB
Rosenberg_Preprint_20210114.pdf
4.1 MB
Rosenberg_Revision.pdf
4.6 MB
apparatus
.DS_Store
6.1 kB
Maze fabrication.md
2.2 kB
maze-design.dxf
193.0 kB
maze-design.pdf
39.6 kB
code
.DS_Store
6.1 kB
MM_Maze_Utils.py
17.0 kB
MM_Plot_Utils.py
8.2 kB
MM_Traj_Utils.py
52.3 kB
__pycache__
MM_Maze_Utils.cpython-38.pyc
16.0 kB
MM_Maze_Utils_r.cpython-38.pyc
16.1 kB
MM_Plot_Utils.cpython-38.pyc
6.5 kB
MM_Plot_Utils_r.cpython-38.pyc
6.5 kB
MM_Traj_Utils.cpython-38.pyc
42.8 kB
MM_Traj_Utils_r.cpython-38.pyc
37.1 kB
data_loader.cpython-38.pyc
3.3 kB
data_loader_r.cpython-38.pyc
3.3 kB
meta_data_loader.cpython-38.pyc
6.1 kB
query_data.cpython-38.pyc
1.7 kB
query_data_r.cpython-38.pyc
1.7 kB
figs
.DS_Store
6.1 kB
B1_Rew_Path7s.pdf
13.7 kB
BparameterEarlyLate.pdf
13.4 kB
C1_Rew_Path7s.pdf
13.9 kB
C3-FitSample.pdf
15.2 kB
C3-FitSamplePoolLR.pdf
15.2 kB
C9_Rew_Path7s.pdf
14.2 kB
CrossEntropiesTJsExplore.pdf
17.0 kB
CrossEntropiesTJsExploreLevelsLR3.pdf
17.6 kB
EffBiasedWalkVsMarkov.pdf
12.1 kB
EffBiasedWalkVsMouse3.pdf
12.1 kB
EfficiencyEarlyLate.pdf
12.1 kB
EfficiencyHisto.pdf
12.3 kB
Fig-EfficiencyFit-B3.pdf
11.4 kB
Fig-EfficiencyFit-C6.pdf
11.4 kB
FirstHomeRunBouts.pdf
2.4 MB
FirstHomeStarts.pdf
4.2 kB
HomeRunLengths.pdf
15.8 kB
HomeRunLengthsZoom.pdf
10.6 kB
ModesVsTime2.pdf
16.5 kB
NewNodeCurves.pdf
13.0 kB
NewNodesAllMice3.pdf
13.0 kB
NewNodesBiased5.pdf
13.8 kB
NewNodesOneMouse3.pdf
12.2 kB
NodeBiasMarkov.pdf
15.5 kB
NodeBiasWalk.pdf
16.0 kB
NodeNumbers.pdf
8.5 kB
NodePrefRew.pdf
4.9 kB
NodePrefScatter1.pdf
15.6 kB
NodePrefScatter2.pdf
16.7 kB
NodePrefUnrew.pdf
4.9 kB
NoseTrajectoryA.pdf
232.2 kB
NoseTrajectoryB.pdf
44.4 kB
NoseTrajectoryC.pdf
20.0 kB
NoseTrajectoryD.pdf
45.7 kB
OutReturnOverlapFraction.pdf
14.0 kB
OverlapFraction.pdf
16.3 kB
P_BF vs P_SF.pdf
12.9 kB
P_BS vs P_SA.pdf
12.9 kB
PrePost_A1.pdf
742.7 kB
PrePost_D7.pdf
572.6 kB
PrePost_D9.pdf
815.2 kB
PrePost_F2.pdf
511.9 kB
Rate_Entry_Rew_2.pdf
14.4 kB
Rate_Entry_Unrew_2.pdf
14.7 kB
Rate_Exit_Rew_2.pdf
13.6 kB
Rate_Exit_Unrew_2.pdf
13.9 kB
RewPie.pdf
9.5 kB
RewardsWaterControlPathsAll.pdf
30.0 kB
RewardsWaterControlPathsAll2.pdf
39.8 kB
RotationAll2.pdf
43.9 kB
RotationEach.pdf
27.8 kB
RotationSpeed.pdf
18.0 kB
RotationSpeedAvg.pdf
13.1 kB
RotationSpeedEach.pdf
18.0 kB
RotationTwoBouts_A1.pdf
39.0 kB
SpeedVsTime3.pdf
15.0 kB
SpeedVsTimeEarly3.pdf
14.5 kB
TimeInMaze4.pdf
14.8 kB
TimeInMazeImg.pdf
19.2 kB
TimeInMazeZoom4.pdf
13.7 kB
Timeline5.pdf
24.3 kB
UnrewPie.pdf
7.7 kB
VarVsFixedLevelsLR.pdf
12.8 kB
WaterRunLengthMedianHistStack.pdf
23.7 kB
outdata
.DS_Store
6.1 kB
A1a-tf
8.4 MB
A1b-tf
1.3 MB
A1b-tr
1.3 MB
B1-Half1-Modes1
693 Bytes
B1-Half2-Modes1
693 Bytes
B1-MarkovSim-tf
1.6 MB
B1-Modes1
717 Bytes
B1-RW5-tf
1.8 MB
B1-TJ1-EX1-Fix-Split5
277 Bytes
B1-TJ1-EX1-Fix-Split5-Train
277 Bytes
B1-TJ1-EX1-Var-Split5
341 Bytes
B1-TJ1-EX1-Var-Split5-Train
341 Bytes
B1-tf
6.3 MB
B2-Half1-Modes1
717 Bytes
B2-Half2-Modes1
693 Bytes
B2-MarkovSim-tf
1.6 MB
B2-Modes1
741 Bytes
B2-RW5-tf
1.7 MB
B2-TJ1-EX1-Fix-Split5
277 Bytes
B2-TJ1-EX1-Fix-Split5-Train
277 Bytes
B2-TJ1-EX1-Var-Split5
341 Bytes
B2-TJ1-EX1-Var-Split5-Train
341 Bytes
B2-tf
8.7 MB
B3-Half1-Modes1
693 Bytes
B3-Half2-Modes1
669 Bytes
B3-MarkovSim-tf
1.6 MB
B3-Modes1
717 Bytes
B3-RW5-tf
1.8 MB
B3-TJ1-EX1-Fix-Split5
277 Bytes
B3-TJ1-EX1-Fix-Split5-Train
277 Bytes
B3-TJ1-EX1-Var-Split5
341 Bytes
B3-TJ1-EX1-Var-Split5-Train
341 Bytes
B3-tf
4.7 MB
B4-Half1-Modes1
717 Bytes
B4-Half2-Modes1
717 Bytes
B4-MarkovSim-tf
1.6 MB
B4-Modes1
741 Bytes
B4-RW5-tf
1.7 MB
B4-TJ1-EX1-Fix-Split5
277 Bytes
B4-TJ1-EX1-Fix-Split5-Train
277 Bytes
B4-TJ1-EX1-Var-Split5
341 Bytes
B4-TJ1-EX1-Var-Split5-Train
341 Bytes
B4-tf
10.7 MB
B5-Half1-Modes1
717 Bytes
B5-Half2-Modes1
717 Bytes
B5-MarkovSim-tf
1.6 MB
B5-Modes1
741 Bytes
B5-RW5-tf
1.7 MB
B5-TJ1-EX1-Fix-Split5
277 Bytes
B5-TJ1-EX1-Fix-Split5-Train
277 Bytes
B5-TJ1-EX1-Var-Split5
341 Bytes
B5-TJ1-EX1-Var-Split5-Train
341 Bytes
B5-tf
8.4 MB
B6-Half1-Modes1
717 Bytes
B6-Half2-Modes1
717 Bytes
B6-MarkovSim-tf
1.6 MB
B6-Modes1
741 Bytes
B6-RW5-tf
1.7 MB
B6-TJ1-EX1-Fix-Split5
277 Bytes
B6-TJ1-EX1-Fix-Split5-Train
277 Bytes
B6-TJ1-EX1-Var-Split5
341 Bytes
B6-TJ1-EX1-Var-Split5-Train
341 Bytes
B6-tf
8.7 MB
B7-Half1-Modes1
693 Bytes
B7-Half2-Modes1
693 Bytes
B7-MarkovSim-tf
1.6 MB
B7-Modes1
717 Bytes
B7-RW5-tf
1.8 MB
B7-TJ1-EX1-Fix-Split5
277 Bytes
B7-TJ1-EX1-Fix-Split5-Train
277 Bytes
B7-TJ1-EX1-Var-Split5
341 Bytes
B7-TJ1-EX1-Var-Split5-Train
341 Bytes
B7-tf
7.2 MB
BZentropies
288 Bytes
C1-Half1-Modes1
717 Bytes
C1-Half2-Modes1
717 Bytes
C1-MarkovSim-tf
1.6 MB
C1-Modes1
741 Bytes
C1-RW5-tf
1.7 MB
C1-TJ1-EX1-Fix-Split5
277 Bytes
C1-TJ1-EX1-Fix-Split5-Train
277 Bytes
C1-TJ1-EX1-Var-Split5
341 Bytes
C1-TJ1-EX1-Var-Split5-Train
341 Bytes
C1-tf
8.0 MB
C3-Half1-Modes1
717 Bytes
C3-Half2-Modes1
717 Bytes
C3-MarkovSim-tf
1.6 MB
C3-Modes1
741 Bytes
C3-RW5-tf
1.8 MB
C3-TJ1-EX1-Fix-Split5
277 Bytes
C3-TJ1-EX1-Fix-Split5-Train
277 Bytes
C3-TJ1-EX1-Var-Split5
341 Bytes
C3-TJ1-EX1-Var-Split5-Train
341 Bytes
C3-tf
8.6 MB
C6-Half1-Modes1
717 Bytes
C6-Half2-Modes1
717 Bytes
C6-MarkovSim-tf
1.6 MB
C6-Modes1
741 Bytes
C6-RW5-tf
1.7 MB
C6-TJ1-EX1-Fix-Split5
277 Bytes
C6-TJ1-EX1-Fix-Split5-Train
277 Bytes
C6-TJ1-EX1-Var-Split5
341 Bytes
C6-TJ1-EX1-Var-Split5-Train
341 Bytes
C6-tf
9.0 MB
C7-Half1-Modes1
717 Bytes
C7-Half2-Modes1
717 Bytes
C7-MarkovSim-tf
1.6 MB
C7-Modes1
741 Bytes
C7-RW5-tf
1.8 MB
C7-TJ1-EX1-Fix-Split5
277 Bytes
C7-TJ1-EX1-Fix-Split5-Train
277 Bytes
C7-TJ1-EX1-Var-Split5
341 Bytes
C7-TJ1-EX1-Var-Split5-Train
341 Bytes
C7-tf
9.8 MB
C8-Half1-Modes1
717 Bytes
C8-Half2-Modes1
717 Bytes
C8-MarkovSim-tf
1.6 MB
C8-Modes1
741 Bytes
C8-RW5-tf
1.8 MB
C8-TJ1-EX1-Fix-Split5
277 Bytes
C8-TJ1-EX1-Fix-Split5-Train
277 Bytes
C8-TJ1-EX1-Var-Split5
341 Bytes
C8-TJ1-EX1-Var-Split5-Train
341 Bytes
C8-tf
11.1 MB
C9-Half1-Modes1
717 Bytes
C9-Half2-Modes1
717 Bytes
C9-MarkovSim-tf
1.6 MB
C9-Modes1
741 Bytes
C9-RW5-tf
1.7 MB
C9-TJ1-EX1-Fix-Split5
277 Bytes
C9-TJ1-EX1-Fix-Split5-Train
277 Bytes
C9-TJ1-EX1-Var-Split5
341 Bytes
C9-TJ1-EX1-Var-Split5-Train
341 Bytes
C9-tf
11.0 MB
D3-Half1-Modes1
693 Bytes
D3-Half2-Modes1
693 Bytes
D3-MarkovSim-tf
1.6 MB
D3-Modes1
717 Bytes
D3-RW5-tf
1.8 MB
D3-TJ1-EX1-Fix-Split5
277 Bytes
D3-TJ1-EX1-Fix-Split5-Train
277 Bytes
D3-TJ1-EX1-Var-Split5
341 Bytes
D3-TJ1-EX1-Var-Split5-Train
341 Bytes
D3-tf
7.4 MB
D4-Half1-Modes1
717 Bytes
D4-Half2-Modes1
717 Bytes
D4-MarkovSim-tf
1.6 MB
D4-Modes1
741 Bytes
D4-RW5-tf
1.7 MB
D4-TJ1-EX1-Fix-Split5
277 Bytes
D4-TJ1-EX1-Fix-Split5-Train
277 Bytes
D4-TJ1-EX1-Var-Split5
341 Bytes
D4-TJ1-EX1-Var-Split5-Train
341 Bytes
D4-tf
9.8 MB
D5-Half1-Modes1
717 Bytes
D5-Half2-Modes1
717 Bytes
D5-MarkovSim-tf
1.6 MB
D5-Modes1
765 Bytes
D5-RW5-tf
1.7 MB
D5-TJ1-EX1-Fix-Split5
277 Bytes
D5-TJ1-EX1-Fix-Split5-Train
277 Bytes
D5-TJ1-EX1-Var-Split5
341 Bytes
D5-TJ1-EX1-Var-Split5-Train
341 Bytes
D5-tf
10.0 MB
D6-tf
354.7 kB
D7-Half1-Modes1
717 Bytes
D7-Half2-Modes1
717 Bytes
D7-MarkovSim-tf
1.6 MB
D7-Modes1
765 Bytes
D7-RW5-tf
1.7 MB
D7-TJ1-EX1-Fix-Split5
277 Bytes
D7-TJ1-EX1-Fix-Split5-Train
277 Bytes
D7-TJ1-EX1-Var-Split5
341 Bytes
D7-TJ1-EX1-Var-Split5-Train
341 Bytes
D7-tf
10.4 MB
D7a-tf
20.7 MB
D7b-tf
7.5 MB
D8-Half1-Modes1
717 Bytes
D8-Half2-Modes1
717 Bytes
D8-MarkovSim-tf
1.6 MB
D8-Modes1
741 Bytes
D8-RW5-tf
1.7 MB
D8-TJ1-EX1-Fix-Split5
277 Bytes
D8-TJ1-EX1-Fix-Split5-Train
277 Bytes
D8-TJ1-EX1-Var-Split5
341 Bytes
D8-TJ1-EX1-Var-Split5-Train
341 Bytes
D8-tf
9.2 MB
D9-Half1-Modes1
717 Bytes
D9-Half2-Modes1
717 Bytes
D9-MarkovSim-tf
1.6 MB
D9-Modes1
741 Bytes
D9-RW5-tf
1.7 MB
D9-TJ1-EX1-Fix-Split5
277 Bytes
D9-TJ1-EX1-Fix-Split5-Train
277 Bytes
D9-TJ1-EX1-Var-Split5
341 Bytes
D9-TJ1-EX1-Var-Split5-Train
341 Bytes
D9-tf
9.8 MB
D9a-tf
8.5 MB
D9b-tf
7.0 MB
ExplBiases
863 Bytes
ExplPars3
1.2 kB
ExplRWPars2
559 Bytes
F2a-tf
13.9 MB
F2b-tf
4.4 MB
FirstWaterRuns
43.2 kB
FixEntropies-TJ1-EX1-Split5
402 Bytes
FixEntropies-TJ1-EX1-Split5-LevelsLR
565 Bytes
FourBiasEntropies-TJ1-EX1-Split5
565 Bytes
HomeRuns
107.1 kB
Markov3-TJ1-EX1-Split5-LevelsLR
14.5 kB
MarkovPars2
559 Bytes
MouseSexAge
246 Bytes
NewNodesMarkovSim-B1
562 Bytes
NewNodesMarkovSim-B2
562 Bytes
NewNodesMarkovSim-B3
562 Bytes
NewNodesMarkovSim-B4
562 Bytes
NewNodesMarkovSim-B5
562 Bytes
NewNodesMarkovSim-B6
562 Bytes
NewNodesMarkovSim-B7
562 Bytes
NewNodesMarkovSim-C1
562 Bytes
NewNodesMarkovSim-C3
562 Bytes
NewNodesMarkovSim-C6
562 Bytes
NewNodesMarkovSim-C7
562 Bytes
NewNodesMarkovSim-C8
562 Bytes
NewNodesMarkovSim-C9
562 Bytes
NewNodesMarkovSim-D3
562 Bytes
NewNodesMarkovSim-D4
562 Bytes
NewNodesMarkovSim-D5
562 Bytes
NewNodesMarkovSim-D7
562 Bytes
NewNodesMarkovSim-D8
562 Bytes
NewNodesMarkovSim-D9
562 Bytes
NodePrefs1
4.5 kB
RewExplPars-Half1
367 Bytes
RewExplPars-Half2
367 Bytes
RewardsWaterControlPaths
42.1 kB
RewardsWaterPathsErfModel
1.7 kB
UnrewExplPars-Half1
346 Bytes
UnrewExplPars-Half2
346 Bytes
VarEntropies-TJ1-EX1-Split5
402 Bytes
VarEntropies-TJ1-EX1-Split5-LevelsLR
565 Bytes
rw01-tf
1.6 MB
outdata - tf files only
.DS_Store
6.1 kB
A1a-tf
7.5 MB
A1b-tf
1.3 MB
B1-tf
6.3 MB
B2-tf
8.7 MB
B3-tf
4.7 MB
B4-tf
10.7 MB
B5-tf
8.4 MB
B6-tf
8.7 MB
B7-tf
7.2 MB
C1-tf
8.0 MB
C3-tf
8.6 MB
C6-tf
9.0 MB
C7-tf
9.8 MB
C8-tf
11.1 MB
C9-tf
11.0 MB
D3-tf
7.4 MB
D4-tf
9.8 MB
D5-tf
10.0 MB
D6-tf
354.7 kB
D7-tf
10.4 MB
D7a-tf
20.7 MB
D7b-tf
7.5 MB
D8-tf
9.2 MB
D9-tf
9.8 MB
D9a-tf
3.4 MB
D9b-tf
3.7 MB
F2a-tf
10.5 MB
F2b-tf
4.4 MB