Published 2017 | Version v1
Dataset Open

Coxiella_ Verocells_28dpi

  • 1. ROR icon California Institute of Technology

Description

Coxiella burnetii Nine Mile phase II clone 4 (NMIIC4) strain. Coxiella cells purified from infected Vero cells.

Technical info

Tilt Series Date: 2017-09-25

Data Taken By: Debnath Ghosal

Species / Specimen: Coxiella burnetii

Strain: Nine Mile phase II clone 4

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 130.0 eV/Ų, defocus: -7.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Strain sent to us by Robert Heinzen. Data collected and processed by Debnath Ghosal using Caltech tomography pipeline.

Purification / Growth Conditions / Treatment: Refer to Heinzen lab.

Sample Preparation: Freezing: 100% humidity, 4µl sample, Blot force 6, blot time 4 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.T

dga2017-09-25-73_slicer19015.jpg: multilayer structure beneath the inner membrane dga2017-09-25-73_slicer19016.jpg: multilayer structure beneath the inner membrane

Attached Files

Cb_vero_201709250073.mrc, Tilt Series (Pixel Size 0.39 nm), 1.7 GB

Cb_vero_201709250073_part61_24.rec, Reconstruction (Pixel Size 1.56 nm), 445.4 MB

Files

dga2017-09-25-73_slicer19015.jpg

Files (2.2 GB)

Name Size
1.7 GB (external) Download
445.4 MB (external) Download
md5:77db94e30651d2a71f3409f6fe3e52aa
425.9 kB Preview Download
md5:ce6251098c96e9396a7da775ae56e549
427.5 kB Preview Download
md5:e100c3a7523cf7a8cab373dc7cca0e60
1.1 MB Preview Download
md5:a9466cc51247527a99f4f45c0973fa2f
10.0 MB Preview Download

Additional details

Identifiers

DOI
10.22002/f4vvq-nx264
TILT_SERIES_ID
dga2017-09-25-73

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2017-09-25
Created
2017-09-27
Updated
2017-11-15