Number of Reads | 511,545,735 |
Valid Barcodes | 97.6% |
Sequencing Saturation | 79.5% |
Q30 Bases in Barcode | 97.2% |
Q30 Bases in RNA Read | 93.2% |
Q30 Bases in Sample Index | 96.3% |
Q30 Bases in UMI | 97.2% |
Reads Mapped to Genome | 96.5% |
Reads Mapped Confidently to Genome | 93.2% |
Reads Mapped Confidently to Intergenic Regions | 6.2% |
Reads Mapped Confidently to Intronic Regions | 34.6% |
Reads Mapped Confidently to Exonic Regions | 52.4% |
Reads Mapped Confidently to Transcriptome | 48.4% |
Reads Mapped Antisense to Gene | 1.5% |
Estimated Number of Cells | 6,684 |
Fraction Reads in Cells | 82.8% |
Mean Reads per Cell | 76,532 |
Median Genes per Cell | 1,720 |
Total Genes Detected | 20,548 |
Median UMI Counts per Cell | 5,517 |
Name | FT-SA33412 |
Description | |
Transcriptome | hg19 |
Chemistry | Single Cell 3' v3 |
Cell Ranger Version | 3.0.0 |
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