Number of Reads | 473,704,479 |
Valid Barcodes | 96.9% |
Sequencing Saturation | 87.1% |
Q30 Bases in Barcode | 97.2% |
Q30 Bases in RNA Read | 93.0% |
Q30 Bases in Sample Index | 94.6% |
Q30 Bases in UMI | 97.1% |
Reads Mapped to Genome | 95.4% |
Reads Mapped Confidently to Genome | 84.2% |
Reads Mapped Confidently to Intergenic Regions | 6.9% |
Reads Mapped Confidently to Intronic Regions | 26.2% |
Reads Mapped Confidently to Exonic Regions | 51.1% |
Reads Mapped Confidently to Transcriptome | 47.4% |
Reads Mapped Antisense to Gene | 1.4% |
Estimated Number of Cells | 3,144 |
Fraction Reads in Cells | 62.9% |
Mean Reads per Cell | 150,669 |
Median Genes per Cell | 1,506 |
Total Genes Detected | 18,784 |
Median UMI Counts per Cell | 4,770 |
Name | FT-SA33409 |
Description | |
Transcriptome | hg19 |
Chemistry | Single Cell 3' v3 |
Cell Ranger Version | 3.0.0 |
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