Number of Reads | 547,365,514 |
Valid Barcodes | 97.5% |
Sequencing Saturation | 82.5% |
Q30 Bases in Barcode | 97.3% |
Q30 Bases in RNA Read | 93.4% |
Q30 Bases in Sample Index | 96.6% |
Q30 Bases in UMI | 97.3% |
Reads Mapped to Genome | 95.5% |
Reads Mapped Confidently to Genome | 92.2% |
Reads Mapped Confidently to Intergenic Regions | 6.6% |
Reads Mapped Confidently to Intronic Regions | 36.2% |
Reads Mapped Confidently to Exonic Regions | 49.4% |
Reads Mapped Confidently to Transcriptome | 45.2% |
Reads Mapped Antisense to Gene | 1.8% |
Estimated Number of Cells | 6,172 |
Fraction Reads in Cells | 58.2% |
Mean Reads per Cell | 88,685 |
Median Genes per Cell | 723 |
Total Genes Detected | 19,902 |
Median UMI Counts per Cell | 1,980 |
Name | FT-SA33411 |
Description | |
Transcriptome | hg19 |
Chemistry | Single Cell 3' v3 |
Cell Ranger Version | 3.0.0 |
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