Number of Reads | 575,768,532 |
Valid Barcodes | 97.7% |
Sequencing Saturation | 79.1% |
Q30 Bases in Barcode | 97.3% |
Q30 Bases in RNA Read | 93.4% |
Q30 Bases in Sample Index | 93.8% |
Q30 Bases in UMI | 97.2% |
Reads Mapped to Genome | 96.6% |
Reads Mapped Confidently to Genome | 93.3% |
Reads Mapped Confidently to Intergenic Regions | 6.4% |
Reads Mapped Confidently to Intronic Regions | 32.2% |
Reads Mapped Confidently to Exonic Regions | 54.6% |
Reads Mapped Confidently to Transcriptome | 50.6% |
Reads Mapped Antisense to Gene | 1.5% |
Estimated Number of Cells | 7,974 |
Fraction Reads in Cells | 76.1% |
Mean Reads per Cell | 72,205 |
Median Genes per Cell | 1,596 |
Total Genes Detected | 20,615 |
Median UMI Counts per Cell | 5,002 |
Name | FT-SA33413 |
Description | |
Transcriptome | hg19 |
Chemistry | Single Cell 3' v3 |
Cell Ranger Version | 3.0.0 |
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