Preview

capblood_seq_processed
- AM1
  - barcode_transcript_counts.sdt
    
    214.1 MB
  - cell_transcript_counts_cellranger_filtered.sdt
    
    65.2 MB
  - cell_transcript_counts_debris_filtered.sdt
    
    51.2 MB
  - cell_transcript_counts_normalized.sdt
    
    48.2 MB
  - cell_transcript_counts_visualization.sdt
    
    48.2 MB
  - normalized_normalized.sdt
    
    120.2 MB
  - normalized_visualization.sdt
    
    120.2 MB
  - transformed_NMF_visualization.csv
    
    2.1 MB
  - transformed_PCA_visualization.csv
    
    2.0 MB
  - transformed_SVD_visualization.csv
    
    2.0 MB
  - transformed_TSNE_visualization.csv
    
    124.7 kB
- AM2
  - barcode_transcript_counts.sdt
    
    277.3 MB
  - cell_transcript_counts_cellranger_filtered.sdt
    
    112.8 MB
  - cell_transcript_counts_debris_filtered.sdt
    
    102.4 MB
  - cell_transcript_counts_normalized.sdt
    
    98.4 MB
  - cell_transcript_counts_visualization.sdt
    
    98.4 MB
  - normalized_normalized.sdt
    
    245.4 MB
  - normalized_visualization.sdt
    
    245.4 MB
  - transformed_NMF_visualization.csv
    
    4.4 MB
  - transformed_PCA_visualization.csv
    
    4.2 MB
  - transformed_SVD_visualization.csv
    
    4.2 MB
  - transformed_TSNE_visualization.csv
    
    265.4 kB
- AM3
  - barcode_transcript_counts.sdt
    
    221.6 MB
  - cell_transcript_counts_cellranger_filtered.sdt
    
    92.2 MB
  - cell_transcript_counts_debris_filtered.sdt
    
    85.2 MB
  - cell_transcript_counts_normalized.sdt
    
    81.2 MB
  - cell_transcript_counts_visualization.sdt
    
    81.2 MB
  - normalized_normalized.sdt
    
    202.7 MB
  - normalized_visualization.sdt
    
    202.7 MB
  - transformed_NMF_visualization.csv
    
    3.4 MB
  - transformed_PCA_visualization.csv
    
    3.3 MB
  - transformed_SVD_visualization.csv
    
    3.3 MB
  - transformed_TSNE_visualization.csv
    
    208.0 kB
- Dobreva2020
  - differential_expression.xlsx
    
    13.6 MB
  - dobreva2020_nepoch_50_lr_1.0e-03_latent.pickle
    
    1.0 MB
  - dobreva2020_nepoch_50_lr_1.0e-03_weights.pickle
    
    46.0 MB
- Hashimoto2019
  - hashimoto2019_nepoch_50_lr_1.0e-03_latent.pickle
    
    799.9 kB
  - hashimoto2019_nepoch_50_lr_1.0e-03_weights.pickle
    
    60.3 MB
  - labels.csv
    
    763.2 kB
- Hashimoto2019_cell_type_percentages.csv
  
  381 Bytes
- Hu2019
  - hu2019_nepoch_50_lr_1.0e-03_latent.pickle
    
    385.8 kB
  - hu2019_nepoch_50_lr_1.0e-03_weights.pickle
    
    86.8 MB
  - labels.csv
    
    346.1 kB
- Hu2019_cell_type_percentages.csv
  
  198 Bytes
- Lee2020
  - labels.csv
    
    798.7 kB
  - lee2020_nepoch_50_lr_1.0e-03_latent.pickle
    
    988.1 kB
  - lee2020_nepoch_50_lr_1.0e-03_weights.pickle
    
    86.4 MB
- Lee2020_cell_type_percentages.csv
  
  314 Bytes
- PM1
  - barcode_transcript_counts.sdt
    
    163.9 MB
  - cell_transcript_counts_cellranger_filtered.sdt
    
    37.1 MB
  - cell_transcript_counts_debris_filtered.sdt
    
    30.0 MB
  - cell_transcript_counts_normalized.sdt
    
    27.7 MB
  - cell_transcript_counts_visualization.sdt
    
    27.7 MB
  - normalized_normalized.sdt
    
    69.0 MB
  - normalized_visualization.sdt
    
    69.0 MB
  - transformed_NMF_visualization.csv
    
    1.2 MB
  - transformed_PCA_visualization.csv
    
    1.1 MB
  - transformed_SVD_visualization.csv
    
    1.1 MB
  - transformed_TSNE_visualization.csv
    
    72.8 kB
- PM2
  - barcode_transcript_counts.sdt
    
    223.9 MB
  - cell_transcript_counts_cellranger_filtered.sdt
    
    59.5 MB
  - cell_transcript_counts_debris_filtered.sdt
    
    42.5 MB
  - cell_transcript_counts_normalized.sdt
    
    39.5 MB
  - cell_transcript_counts_visualization.sdt
    
    39.5 MB
  - labels_demuxlet.csv
    
    7.1 MB
  - normalized_normalized.sdt
    
    98.4 MB
  - normalized_visualization.sdt
    
    98.4 MB
  - transformed_NMF_visualization.csv
    
    1.7 MB
  - transformed_PCA_visualization.csv
    
    1.6 MB
  - transformed_SVD_visualization.csv
    
    1.6 MB
  - transformed_TSNE_visualization.csv
    
    101.7 kB
- PM3
  - barcode_transcript_counts.sdt
    
    263.6 MB
  - cell_transcript_counts_cellranger_filtered.sdt
    
    102.4 MB
  - cell_transcript_counts_debris_filtered.sdt
    
    91.4 MB
  - cell_transcript_counts_normalized.sdt
    
    87.3 MB
  - cell_transcript_counts_visualization.sdt
    
    87.3 MB
  - normalized_normalized.sdt
    
    217.9 MB
  - normalized_visualization.sdt
    
    217.9 MB
  - transformed_NMF_visualization.csv
    
    3.6 MB
  - transformed_PCA_visualization.csv
    
    3.5 MB
  - transformed_SVD_visualization.csv
    
    3.5 MB
  - transformed_TSNE_visualization.csv
    
    220.3 kB
- VenousVsCapillary
  - differential_expression.xlsx
    
    16.2 MB
  - nepoch_50_lr_1.0e-03_clusters.pickle
    
    636.9 kB
  - nepoch_50_lr_1.0e-03_latent.pickle
    
    3.2 MB
  - nepoch_50_lr_1.0e-03_tsne.pickle
    
    636.9 kB
  - nepoch_50_lr_1.0e-03_weights.pickle
    
    43.9 MB
- capillary_cell_type_percentages.csv
  
  1.5 kB
- debris_filtering_statistics.csv
  
  223 Bytes
- diurnal_genes_corrected_p_values.csv
  
  716.8 kB
- gene_diurnality.csv
  
  737.0 kB
- gene_individuality.csv
  
  174.9 kB
- sig_genes.csv
  
  4.0 kB
- subject_cell_type_significance_counts.csv
  
  119 Bytes

capblood_seq_processed.zip