data.zip
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220 Bytes
data
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120 Bytes
processed_data
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120 Bytes
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220 Bytes
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220 Bytes
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220 Bytes
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312 Bytes
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312 Bytes
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220 Bytes
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220 Bytes
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368 Bytes
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276 Bytes
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forebrain
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344 Bytes
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288 Bytes
GSE122187_WT_E6.5_1
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212 Bytes
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312 Bytes
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GSE122187_WT_E7.0_1
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212 Bytes
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212 Bytes
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312 Bytes
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212 Bytes
GSE122187_WT_E8.5_1ab
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212 Bytes
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333 Bytes
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220 Bytes
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220 Bytes
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591 Bytes
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tms_10X
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120 Bytes
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712 Bytes
tms_FACS
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312 Bytes
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776 Bytes
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773 Bytes
FACS
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
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312 Bytes
data
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processed_data
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96 Bytes
.ipynb_checkpoints
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glasbey.RDS
291 Bytes
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228.7 MB
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282.9 MB
pca_proj.RDS
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.ipynb_checkpoints
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85.0 MB
E6.75_post_filtered.h5ad
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356.1 MB
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314.6 MB
E7.75_post_filtered.h5ad
422.3 MB
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452.6 MB
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441.2 MB
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475.8 MB
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1.8 MB
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3.1 MB
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5.6 MB
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5.7 MB
Marioni_E8.0_10x_allgenes.csv
5.4 MB
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5.4 MB
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6.3 MB
blood_allgenes.csv
2.8 MB
epithelial_mesenchymal_transition
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embryo_Tang2018_processed.rdata
254.4 MB
forelimb
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.ipynb_checkpoints
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791.8 MB
Cell_class_colors.csv
535 Bytes
all_genes_forelimb_10x.h5ad
12.7 GB
forelimb_10x.h5ad
8.0 GB
forelimb_all_genes.csv
25.7 MB
forelimb_meta_data.csv
11.9 kB
gastrulation
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2.7 MB
tms_10X
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.ipynb_checkpoints
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29.3 MB
tabula_muris_senis_1m_all_genes-checkpoint.csv
18.6 MB
tabula_muris_senis_30m_all_genes-checkpoint.csv
27.5 MB
tms_10X_18m_all_genes.csv
29.3 MB
tms_10X_1m_all_genes.csv
18.6 MB
tms_10X_21m_all_genes.csv
25.9 MB
tms_10X_24m_all_genes.csv
15.6 MB
tms_10X_30m_all_genes.csv
27.5 MB
tms_10X_3m_all_genes.csv
26.2 MB
tms_FACS
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245 Bytes
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22 Bytes
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285 Bytes
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57 Bytes
presentation
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5 Bytes
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27 Bytes
sources
per
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655 Bytes
6AC128D6-contents
70 Bytes
tutorial
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0 Bytes
.ipynb_checkpoints
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54.6 kB
pathbank
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2.1 kB
pathbank_all_proteins.csv
136.1 MB
pathway_df.csv
475.2 kB
pathway_df_linux_format.tsv
80.2 kB
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429.9 kB
pathway_genes_list_01202023.csv
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sc_data
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early_organogenesis
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.ipynb_checkpoints
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85.0 MB
E6.75_post_filtered.h5ad
48.3 MB
E7.0_post_filtered.h5ad
410.8 MB
E7.25_post_filtered.h5ad
356.1 MB
E7.5_post_filtered.h5ad
314.6 MB
E7.75_post_filtered.h5ad
422.3 MB
E8.0_post_filtered.h5ad
452.6 MB
E8.25_post_filtered.h5ad
441.2 MB
E8.5_post_filtered.h5ad
475.8 MB
barcodes.tsv
2.2 MB
genes.tsv
810.8 kB
matrix.mtx
6.7 GB
meta.csv
23.1 MB
epithelial_mesenchymal_transition
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8.2 kB
.ipynb_checkpoints
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578.5 kB
CELL_TYPES.xlsx
37.8 kB
GSE87038_Cell_Information_and_Barcode_Information.xlsx
106.0 kB
GSE87038_Mouse_Organogenesis_UMI_counts_matrix.xlsx
160.2 MB
cell_assignments.csv
67.3 kB
data
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6.1 kB
cell_assignments.csv
67.3 kB
forebrain_markers.csv
2.7 kB
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97.7 MB
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6.1 kB
.ipynb_checkpoints
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11.8 kB
fig2.pdf
41.1 kB
fig3.pdf
30.1 kB
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46.4 kB
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1_3.csv
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820.4 kB
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825.5 kB
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810.0 kB
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640.9 kB
3_4.csv
851.9 kB
3_5.csv
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3_6.csv
659.9 kB
4_5.csv
757.6 kB
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611.9 kB
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593.3 kB
counts.rds
347.9 kB
forebrain.h5ad
14.5 MB
forebrain_sds.rds
17.1 kB
forebrain_sling.rds
3.3 MB
nephron_sds.rds
17.1 kB
pseudotime.rds
3.7 kB
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1.4 kB
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2.7 kB
hindbrain
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6.1 kB
figures
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11.8 kB
fig2.pdf
39.3 kB
fig3.pdf
29.0 kB
pca_variance_ratio_fig4.pdf
12.0 kB
umap_fig5.pdf
39.5 kB
results
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13.1 MB
matrix.csv
97.7 MB
forelimb
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9.5 GB
meta.tsv
9.5 MB
gastrulation
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10.2 kB
41586_2020_2552_MOESM5_ESM.xlsx
10.7 MB
GSE122187_WT_E6.5_1
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102.0 MB
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658.5 MB
GSE122187_WT_E7.5_1
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470.8 kB
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1.2 GB
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metadata_E8.0.csv
1.1 MB
metadata_E8.5.csv
1.1 MB
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6.1 kB
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122.9 MB
GSM3494339_Lib2-2_E5.5_counts.csv
396.9 MB
GSM3494340_Lib2-3_E5.5_counts.csv
276.8 MB
sc_endoderm_all_cells_metadata.csv
6.3 MB
kharchenko_trunk_neural_crest
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6.1 kB
GSE129114_E9.5_trunk_Wnt1_counts.txt
60.6 MB
kharchenko_trunk_neural_crest-data-GSE129114_E9.5_trunk_Wnt1_counts.h5ad
23.8 MB
tms_10X
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6.1 kB
tabula-muris-senis-droplet-processed-official-annotations.h5ad
8.2 GB
tms_FACS
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8.2 kB
FACS
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84.2 MB
Brain_Microglia-counts.csv
235.2 MB
Brain_Neurons-counts.csv
285.4 MB
Colon-counts.csv
211.7 MB
Fat-counts.csv
293.6 MB
Heart-counts.csv
350.6 MB
Kidney-counts.csv
41.8 MB
Liver-counts.csv
48.9 MB
Lung-counts.csv
95.7 MB
Mammary-counts.csv
135.6 MB
Marrow-counts.csv
270.0 MB
Muscle-counts.csv
104.2 MB
Pancreas-counts.csv
99.6 MB
Skin-counts.csv
124.8 MB
Spleen-counts.csv
84.5 MB
Thymus-counts.csv
77.8 MB
Tongue-counts.csv
74.8 MB
Trachea-counts.csv
70.9 MB
annotations_FACS.csv
4.3 MB
metadata_FACS.csv
10.7 kB