Published 2015 | Version v1
Dataset Open

V. cholerae RT4236 (stationary)

Creators

  • 1. ROR icon California Institute of Technology

Description

Classical strain with ctxA deletion.Cell harbors pMT5 plasmid (inducible toxT).

Technical info

Tilt Series Date: 2015-04-09

Data Taken By: Yi-Wei Chang

Species / Specimen: Vibrio cholerae

Strain: O395-N1

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Ų, defocus: -6.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Strain from Ronald K. Taylor

Purification / Growth Conditions / Treatment: ON cultures of Vibrio cholerae O395 NI pMT5 grown in LB pH 6.5, 1 mM IPTG and 100 ug/mL ampicilin

Sample Preparation: Vitrobot (MK iv) settings: 100% humidity, 4µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 2.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.

ycw2015-04-09-27_slicer16269.jpg: double leaflets

Attached Files

20150409_AK005_10027.mrc, Tilt Series (Pixel Size 0.39 nm), 3.4 GB

20150409_AK005_10027_full.rec, Reconstruction (Pixel Size 1.56 nm), 534.5 MB

Files

keyimg_ycw2015-04-09-27.jpg

Files (4.0 GB)

Name Size
3.4 GB (external) Download
534.5 MB (external) Download
md5:260f1211146884f7cb9ba840c134f5b6
1.1 MB Preview Download
md5:b5590b1fede9cce84afec4d7599274b4
18.4 MB Preview Download
md5:ccb535dc6bc6867fab2907793f085234
592.6 kB Preview Download

Additional details

Identifiers

DOI
10.22002/hykne-m5281
TILT_SERIES_ID
ycw2015-04-09-27

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2015-04-09
Created
2015-04-10
Updated
2015-10-27