Published June 17, 2021 | Version 1.0
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Cao 2017 C. elegans L2 larvae scRNAseq dataset wrangled into WormBase standard anndata

  • 1. ROR icon California Institute of Technology


This is part of a curated collection of all C. elegans single cell RNA sequencing high throughput data wrangled into the anndata format in .h5ad files with standard fields, plus any number of optional fields that vary depending on the metadata the authors provide. For the convention used to wrangle the h5ad files see Data description: 35,987 L2 larvae profiled with sci-RNA-seq Original study: Comprehensive single-cell transcriptional profiling of a multicellular organism Cao J, Packer JS, Ramani V, Cusanovich DA, Huynh C, Daza R, Qiu X, Lee C, Furlan SN, Steemers FJ, Adey A, Waterston RH, Trapnell C, Shendure J. Science. 2017 Aug 18;357(6352):661-667.


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September 8, 2022
November 18, 2022