Published 2017 | Version v1
Dataset Open

Xanthomonas vs Caulobac (-T1SS)

  • 1. ROR icon California Institute of Technology

Description

Xac WT pBRaφ pBRR MCS5 GFP (code 9) vs Caulobacter (delta-cdzAB) competition. Caulobacter strain is a T1SS deletion strain.

Technical info

Tilt Series Date: 2017-10-21

Data Taken By: Debnath Ghosal

Species / Specimen: Xanthomonas citri

Strain: pv citri 306

Tilt Series Settings: Single Axis, tilt range: (-50.0°, 50.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Ų, defocus: -7.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Chuck Farah lab made the Xac strain, Caulobacter strain is from Laub lab. Data collected and processed by Mohammed Kaplan and Debnath Ghosal.

Purification / Growth Conditions / Treatment: 4 µL mixture of Xac and Caulobacter cells were pipetted on top of Au-Finder grids. These grids were glow discharged in advance and kept on top of Agar pads. Carbon side up. These were then kept at the BSL-II hood and left for about 10 min before freezing.

Sample Preparation: Freezing conditions: Blot force 6, wait time=0, drain time =1 sec, blot manually.

Attached Files

Xan_CaulDelT1_20172110d0005.mrc, Tilt Series (Pixel Size 0.39 nm), 1.5 GB

Xan_CaulDelT1_20172110d0005.rec, Reconstruction (Pixel Size 1.56 nm), 889.0 MB

Files

keyimg_dga2017-10-21-47.jpg

Files (2.4 GB)

Name Size
md5:7c6edca94211a638cf2a69eb5b791558
1.0 MB Preview Download
md5:2b7e6d15fa7486bf9434978f89125376
16.3 MB Preview Download
1.5 GB (external) Download
889.0 MB (external) Download

Additional details

Identifiers

DOI
10.22002/jdtf7-20218
TILT_SERIES_ID
dga2017-10-21-47

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2017-10-21
Created
2017-10-24
Updated
2017-10-24