Published 2014 | Version v1
Dataset Open

Sulfolobus solfac.P2+STIV

  • 1. ROR icon California Institute of Technology

Contributors

Researcher:

Description

STIV - infected Sulfolobus solfataricus, Sulfolobus turreted icosahedral virus, Taxonomy ID 269145, Sulfolobus solfataricus, thermophile, pyramid, intrapyramidal body, virus infection 10 hour post infection

Technical info

Tilt Series Date: 2014-02-05

Data Taken By: Rasika Ramdasi

Species / Specimen: Sulfolobus solfataricus

Strain: P2

Tilt Series Settings: Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Ų, defocus: -8.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: raptor

Collaborators and Roles: With Jamie Snyder at MSU, Montana.

Sample Preparation: S. solfataricus strain P2 cultures were infected with STIV as previously described (Ortmann et al., 2006). Sulfolobus were grown up from glycerol stock in media 182 (pH 3.5), 80°C and passage once. The cultures were passed second time to media 182 (pH 2.5) and infected with STIV at MOI ~10 at OD 650 nm ~0.2. At 10 hour Post infection, cells were concentrated ~20 fold by centrifugation.

rra2014-02-05-2_slicer10563.jpg: Huge intrapyramidal body- 255 nm

Attached Files

atlas7stiv100002.mrc, Tilt Series (Pixel Size 0.39 nm), 3.2 GB

atlas7stiv100002_part111_10.rec, Reconstruction (Pixel Size 1.56 nm), 623.6 MB

Files

keyimg_rra2014-02-05-2.jpg

Files (3.8 GB)

Name Size
3.2 GB (external) Download
623.6 MB (external) Download
md5:611a14d08c1e03582d6e37d393101aa9
1.1 MB Preview Download
md5:4e8067afb06b0ce1e471fa3c2f8ac50d
20.6 MB Preview Download
md5:1959f7744409e1c686db126f4b6625bb
336.8 kB Preview Download

Additional details

Identifiers

DOI
10.22002/jg4k1-bw776
TILT_SERIES_ID
rra2014-02-05-2

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2014-02-05
Created
2014-02-06
Updated
2014-11-07