Published 2016 | Version v1
Dataset Open

HupAB knockout_M9_PS151

  • 1. ROR icon California Institute of Technology

Description

Andrew's DNA project

Technical info

Tilt Series Date: 2016-08-24

Data Taken By: Poorna Subramanian

Species / Specimen: Escherichia coli

Strain:

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 18000x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Purification / Growth Conditions / Treatment: grown for 31h from glycerol stock. Froze when OD was 0.41 as such, no spinning. Cell density and distribution looked good.

Attached Files

hupABM9_atlas10011.mrc, Tilt Series (Pixel Size 0.6 nm), 3.4 GB

hupABM9_atlas10011_part121_4.rec, Reconstruction (Pixel Size 2.4 nm), 534.5 MB

psa2016-08-24-15_slicer17041.png, (diffuse blobs and pancake vesicles near the periplasm were seen in other strains of E.coli grown in minimal M9 media. I don't know how common this is in E.coli -andrew), 321.7 kB

Files

keyimg_psa2016-08-24-15.jpg

Files (4.0 GB)

Name Size
3.4 GB (external) Download
534.5 MB (external) Download
md5:73fb33034c38ccc0503dd5b139648a73
1.1 MB Preview Download
md5:4c6d1ceb408fb4c9aff30ab730ee1e05
17.4 MB Preview Download
321.7 kB (external) Download

Additional details

Identifiers

DOI
10.22002/n3f2m-xsp90
TILT_SERIES_ID
psa2016-08-24-15

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2016-08-24
Created
2016-08-24
Updated
2016-09-01