Code for "The Fanconi anemia pathway repairs colibactin-induced DNA interstrand cross-links"

Author: Elliot J. MacKrell

Date: 2024-10

This repository contains the R code required to reproduce the abundance and differential expression analysis featured in the publication. To reproduce the results, proceed with the following instructions:

1. Copy the contents of the zipped repository to a folder.
2. Install {renv} in your R system library if not installed already.
3. Create a new RStudio project in the folder.
4. Execute renv::activate() to activate the project environment.
5. Execute options(renv.config.mran.enabled = FALSE) to avoid installing packages from MRAN.
6. Execute renv::restore() to restore the project environment.