Published February 26, 2021 | Version 1.0
Software Open

Kin Correlation Analysis Code and Data

Creators

  • 1. ROR icon California Institute of Technology
  • 2. UCSB

Description

This resource provides code and example data for performing Kin Correlation Analysis (KCA), which allows inference of cell state transition rates from lineage information and end-point cell state measurements. See related publication for full information. Movie_Tracking.zip contains code for cell tracking and lineage visualization. Data_Analysis.zip contains all code for KCA, including scripts and processed data to reproduce analysis figures from the associated publication. In each .zip file, there is a Readme.txt file that provides instructions on using the code.

Other

Related Publication:

Inferring Cell-State Transition Dynamics from Lineage Trees and Endpoint Single-Cell Measurements

https://doi.org/10.1016/j.cels.2016.10.015

eng

Files

Data_Analysis.zip

Files (5.0 MB)

Name Size
md5:fb0138454b54dda2a35fe993619c57d5
4.8 MB Preview Download
md5:3405e7faf1c1f26e0e3f8627f1ada27b
231.4 kB Preview Download

Additional details

Identifiers

CALTECHDATA_ID
1894

Related works

Is supplement to
10.1016/j.cels.2016.10.015 (DOI)