Kin Correlation Analysis Code and Data

Description

This resource provides code and example data for performing Kin Correlation Analysis (KCA), which allows inference of cell state transition rates from lineage information and end-point cell state measurements. See related publication for full information. Movie_Tracking.zip contains code for cell tracking and lineage visualization. Data_Analysis.zip contains all code for KCA, including scripts and processed data to reproduce analysis figures from the associated publication. In each .zip file, there is a Readme.txt file that provides instructions on using the code.

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Related Publication: Inferring Cell-State Transition Dynamics from Lineage Trees and Endpoint Single-Cell Measurements https://doi.org/10.1016/j.cels.2016.10.015 eng

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