Published 2011 | Version v1
Dataset Open

Cryo-sectioned Jurkat VSVG-pNL4GFP

  • 1. ROR icon California Institute of Technology

Contributors

Description

Jurkats infected by spinoculation with VSVG-pNL4GFP, collected 30 min after synchronous entry, HP frozen and cryo-sectioned by Mark Ladinsky

Technical info

<strong>Tilt Series Date:</strong> 2011-12-12</p>

<strong>Data Taken By:</strong> Cora Woodward</p>

<strong>Species / Specimen:</strong> Jurkat Human T-cell</p>

<strong>Strain:</strong> Clone E6-1</p>

<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Ų, defocus: -6.0 μm, magnification: 22500x. </p>

<strong>Acquisition Software:</strong> UCSF tomo</p>

<strong>Upload Method:</strong> rundir</p>

<strong>Processing Software Used:</strong> imod</p>

<strong>Collaborators and Roles:</strong> pNL4GFP provirus construct from Irvin Chen (UCLA). Vpr-gfp construct to label virus provided by Tom Hope. Virus made at Caltech by Cora Woodward</p>

<strong>Purification / Growth Conditions / Treatment:</strong> infected VSVG-pNL4GFP</p>

<strong>Sample Preparation:</strong> cryo-sectioned by Mark Ladinsky</p>

11dec12_cryosec_pnlegfp_grid3_Batch5_0043_full.jpg: file associated to 3D Image #54399

External Files

Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-25/rawdata/</p>

11dec12_cryosec_pnlegfp_grid3_Batch5_0043.st, Tilt Series (Pixel Size 0.5 nm), 1.0 GB

<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-25/rawdata/11dec12_cryosec_pnlegfp_grid3_Batch5_0043.st" > <i class="download icon"></i> Download </a>

</p>

11dec12_cryosec_pnlegfp_grid3_Batch5_0043_full.rec, Reconstruction (Pixel Size 2.0 nm), 650.3 MB

<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-25/3dimage_54399/11dec12_cryosec_pnlegfp_grid3_Batch5_0043_full.rec" > <i class="download icon"></i> Download </a>

</p>

11dec12_cryosec_pnlegfp_grid3_Batch5_0043_full.tiff, file associated to 3D Image #54399, 1.3 MB

<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-12-25/file_13129/11dec12_cryosec_pnlegfp_grid3_Batch5_0043_full.tiff" > <i class="download icon"></i> Download </a>

</p>

Files

11dec12_cryosec_pnlegfp_grid3_Batch5_0043_full.jpg

Files (14.1 MB)

Name Size
md5:3abf667a58044885495c4da16e04bb95
517.0 kB Preview Download
md5:6e2e1cca0c9324fc4ac87ca95c206ae3
1.0 MB Preview Download
md5:4ab0300b59431a1e90ade3558b86d980
12.5 MB Preview Download

Additional details

Identifiers

DOI
10.22002/qq4be-h9685
TILT_SERIES_ID
cwl2011-12-12-25

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2011-12-12
Created
2015-04-17
Updated
2015-04-17