Figure S13 B2.zip
Figure S13 B2
Brain B2
.DS_Store
6.1 kB
20200605 B1P0S3 Segmentation.ai
36.5 MB
B2_corr_single.fig
414.5 kB
B2_panel_B_clones_on_brain.fig
537.1 kB
B2_panel_C_clones_in_physical_space.fig
414.9 kB
B2_panel_D_clones_on_UMAP.fig
33.2 kB
B2_panel_E_clones_in_expression_space.fig
417.8 kB
B2_panel_F_within.fig
137.2 kB
B2_panel_F_without.fig
57.4 kB
Brain_B2.py
10.6 kB
FISH data
.DS_Store
6.1 kB
pos0_slice3_raw
bc10f.tif
8.4 MB
bc10r.tif
8.4 MB
bc1f.tif
8.4 MB
bc1r.tif
8.4 MB
bc2f.tif
8.4 MB
bc2r.tif
8.4 MB
bc3f.tif
8.4 MB
bc3r.tif
8.4 MB
bc4f.tif
8.4 MB
bc4r.tif
8.4 MB
bc5f.tif
8.4 MB
bc5r.tif
8.4 MB
bc6f.tif
8.4 MB
bc6r.tif
8.4 MB
bc7f.tif
8.4 MB
bc7r.tif
8.4 MB
bc8f.tif
8.4 MB
bc8r.tif
8.4 MB
bc9f.tif
8.4 MB
bc9r.tif
8.4 MB
bcChAT.tif
8.4 MB
bcFru.tif
8.4 MB
bcGad1.tif
8.4 MB
bcSerT.tif
8.4 MB
bcTH.tif
8.4 MB
bcTbh.tif
8.4 MB
bcVGlut.tif
8.4 MB
bccfp.tif
8.4 MB
bcsNPF.tif
8.4 MB
README Brain B2.pdf
72.2 kB
UMAP_output.txt
30.0 kB
analysis_260_000_make_label_image.m
417 Bytes
analysis_260_010_slice_barcodes.ijm.ijm
2.0 kB
analysis_260_020_call_barcodes.m
1.7 kB
analysis_260_021_rehyb_to_dots.m
1.6 kB
analysis_260_022_basic_alignment.m
2.1 kB
analysis_260_030_call_barcodes_from_images.m
9.1 kB
analysis_260_051_background_subtract_images.m
860 Bytes
analysis_260_060_write_output_to_file.m
975 Bytes
analysis_260_065_UMAP_clustering.py
3.2 kB
analysis_260_071_cell_distance_from_ale_table.m
3.7 kB
analysis_260_072_cell_distance_from_ale_table_multi_hist.m
4.3 kB
analysis_260_073_UMAP_percentile.m
4.2 kB
analysis_260_074_corr_single_histogram.m
4.1 kB
analysis_260_080_highlight_clones_in_umap.m
2.4 kB
brain.mat
1.9 MB
call_barcode_from_state_array.m
1.0 kB
cell_barcode_and_expression.txt
21.6 kB
clones
clones_next_brain_5.50
0110012121.png
44.4 kB
2100212021.png
44.3 kB
2110212021.png
45.0 kB
2122011200.png
44.2 kB
2122011221.png
45.8 kB
2122211221.png
44.2 kB
composite 5.50.png
67.9 kB
corr_multi_histrogram.m
4.4 kB
de2bc.m
308 Bytes
getFishDots_from_image.m
817 Bytes
imwarp_same.m
1.2 kB
loadtiff.m
5.3 kB
pos0_full
B1P0S3 Segmentation.tif
75.4 MB
all_cells_barcodes.txt
3.8 kB
im.tif
143.6 kB
im_bc10f.tif
177.4 kB
im_bc10f_shift.tif
177.4 kB
im_bc10r.tif
132.9 kB
im_bc10r_shift.tif
132.9 kB
im_bc1f.tif
138.2 kB
im_bc1f_shift.tif
138.2 kB
im_bc1r.tif
174.0 kB
im_bc1r_shift.tif
173.9 kB
im_bc2f.tif
179.1 kB
im_bc2f_shift.tif
179.0 kB
im_bc2r.tif
132.9 kB
im_bc2r_shift.tif
132.9 kB
im_bc3f.tif
144.5 kB
im_bc3f_shift.tif
144.5 kB
im_bc3r.tif
162.7 kB
im_bc3r_shift.tif
162.7 kB
im_bc4f.tif
136.1 kB
im_bc4f_shift.tif
136.1 kB
im_bc4r.tif
165.8 kB
im_bc4r_shift.tif
165.8 kB
im_bc5f.tif
136.5 kB
im_bc5f_shift.tif
136.5 kB
im_bc5r.tif
144.6 kB
im_bc5r_shift.tif
144.6 kB
im_bc6f.tif
173.3 kB
im_bc6f_shift.tif
173.3 kB
im_bc6r.tif
133.7 kB
im_bc6r_shift.tif
133.6 kB
im_bc7f.tif
226.5 kB
im_bc7f_shift.tif
226.5 kB
im_bc7r.tif
145.2 kB
im_bc7r_shift.tif
145.2 kB
im_bc8f.tif
137.6 kB
im_bc8f_shift.tif
137.6 kB
im_bc8r.tif
162.0 kB
im_bc8r_shift.tif
162.0 kB
im_bc9f.tif
135.9 kB
im_bc9f_shift.tif
135.9 kB
im_bc9r.tif
171.0 kB
im_bc9r_shift.tif
171.0 kB
label.tif
379.4 kB
labels_from_composite_0110012121.tif
119.4 kB
labels_from_composite_2100212021.tif
119.4 kB
labels_from_composite_2110212021.tif
119.7 kB
labels_from_composite_2122011200.tif
119.4 kB
labels_from_composite_2122011221.tif
120.0 kB
labels_from_composite_2122211221.tif
119.4 kB
FISH data
Automation FISH target table.xlsx
68.7 kB
HybCycle_0
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_1
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_10
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_11
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_12
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_13
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_14
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_2
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_3
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_4
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_5
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_6
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_7
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_8
MMStack_Pos0.ome.tif
470.6 MB
HybCycle_9
MMStack_Pos0.ome.tif
470.6 MB
ImageJ restack script 14 slices.ijm
1.3 kB
readme_FigS13FISH.pdf
37.9 kB