Figure S15 B4.zip
Figure S15 B4
Brain B4
096 hyb3aligned pos1slice4 segmentation.ai
38.0 MB
B4_corr_single.fig
316.2 kB
B4_panel_B_clones_on_brain.fig
831.6 kB
B4_panel_C_clones_in_physical_space.fig
313.4 kB
B4_panel_D_clones_on_UMAP.fig
57.3 kB
B4_panel_E_clones_in_expression_space.fig
314.2 kB
B4_panel_F_within.fig
100.6 kB
B4_panel_F_without.fig
113.4 kB
FISH data
pos1_slice4_raw
bc10f.tif
8.4 MB
bc10r.tif
8.4 MB
bc1f.tif
8.4 MB
bc1r.tif
8.4 MB
bc2f.tif
8.4 MB
bc2r.tif
8.4 MB
bc3f.tif
8.4 MB
bc3r.tif
8.4 MB
bc4f.tif
8.4 MB
bc4r.tif
8.4 MB
bc5f.tif
8.4 MB
bc5r.tif
8.4 MB
bc6f.tif
8.4 MB
bc6r.tif
8.4 MB
bc7f.tif
8.4 MB
bc7r.tif
8.4 MB
bc8f.tif
8.4 MB
bc8r.tif
8.4 MB
bc9f.tif
8.4 MB
bc9r.tif
8.4 MB
bcChAT.tif
8.4 MB
bcFru.tif
8.4 MB
bcGad1.tif
8.4 MB
bcSerT.tif
8.4 MB
bcTH.tif
8.4 MB
bcTbh.tif
8.4 MB
bcVGlut.tif
8.4 MB
bccfp.tif
8.4 MB
bcsNPF.tif
8.4 MB
README Brain B4.pdf
72.0 kB
UMAP_output.txt
75.3 kB
analysis_261_000_make_label_image.m
418 Bytes
analysis_261_010_slice_barcodes.ijm.ijm
2.0 kB
analysis_261_020_call_barcodes.m
1.5 kB
analysis_261_021_rehyb_to_dots.m
1.6 kB
analysis_261_022_basic_alignment.m
2.1 kB
analysis_261_030_call_barcodes_from_images.m
9.1 kB
analysis_261_051_background_subtract_images.m
832 Bytes
analysis_261_060_write_output_to_file.m
900 Bytes
analysis_261_065_UMAP_clustering.py
3.2 kB
analysis_261_071_cell_distance_from_ale_table.m
3.7 kB
analysis_261_072_cell_distance_from_ale_table_multi_hist.m
4.3 kB
analysis_261_073_UMAP_percentile.m
4.2 kB
analysis_261_074_corr_single_histogram.m
4.1 kB
analysis_261_080_highlight_clones_in_umap.m
2.5 kB
brain.mat
2.7 MB
call_barcode_from_state_array.m
1.0 kB
cell_barcode_and_expression.txt
55.0 kB
de2bc.m
308 Bytes
getFishDots_from_image.m
817 Bytes
imwarp_same.m
1.2 kB
loadtiff.m
5.3 kB
pos1_full
._B11P1S4 Segmentation.tif
4.1 kB
B11P1S4 Segmentation.tif
75.5 MB
im.tif
160.5 kB
im_bc10f.tif
171.3 kB
im_bc10f_shift.tif
171.2 kB
im_bc10r.tif
136.6 kB
im_bc10r_shift.tif
136.6 kB
im_bc1f.tif
134.5 kB
im_bc1f_shift.tif
134.5 kB
im_bc1r.tif
146.9 kB
im_bc1r_shift.tif
146.9 kB
im_bc2f.tif
169.2 kB
im_bc2f_shift.tif
169.2 kB
im_bc2r.tif
152.9 kB
im_bc2r_shift.tif
152.9 kB
im_bc3f.tif
140.8 kB
im_bc3f_shift.tif
140.8 kB
im_bc3r.tif
161.7 kB
im_bc3r_shift.tif
161.8 kB
im_bc4f.tif
198.0 kB
im_bc4f_shift.tif
198.0 kB
im_bc4r.tif
159.0 kB
im_bc4r_shift.tif
158.9 kB
im_bc5f.tif
146.7 kB
im_bc5f_shift.tif
146.7 kB
im_bc5r.tif
163.4 kB
im_bc5r_shift.tif
163.4 kB
im_bc6f.tif
185.0 kB
im_bc6f_shift.tif
185.0 kB
im_bc6r.tif
138.3 kB
im_bc6r_shift.tif
138.2 kB
im_bc7f.tif
131.8 kB
im_bc7f_shift.tif
131.8 kB
im_bc7r.tif
159.0 kB
im_bc7r_shift.tif
159.1 kB
im_bc8f.tif
147.4 kB
im_bc8f_shift.tif
147.5 kB
im_bc8r.tif
158.4 kB
im_bc8r_shift.tif
158.4 kB
im_bc9f.tif
146.8 kB
im_bc9f_shift.tif
146.8 kB
im_bc9r.tif
157.7 kB
im_bc9r_shift.tif
157.7 kB
label.tif
613.7 kB
FISH data
Automation FISH target table.xlsx
68.7 kB
HybCycle_0
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_1
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_10
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_11
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_12
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_13
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_14
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_2
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_3
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_4
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_5
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_6
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_7
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_8
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
HybCycle_9
MMStack_Pos0.ome.tif
504.3 MB
MMStack_Pos1.ome.tif
503.9 MB
MMStack_Pos2.ome.tif
503.9 MB
ImageJ restack script 15 slices.ijm
1.3 kB
readme_FigS15FISH.pdf
38.0 kB