Published 2014 | Version v1
Dataset Open

Sulfolobus solfac.P2+STIV

  • 1. ROR icon California Institute of Technology

Contributors

Researcher:

Description

STIV - infected Sulfolobus solfataricus, Sulfolobus turreted icosahedral virus, Taxonomy ID 269145, Sulfolobus solfataricus, thermophile, pyramid, intrapyramidal body, virus infection24 hour post infection

Technical info

Tilt Series Date: 2014-01-07

Data Taken By: Rasika Ramdasi

Species / Specimen: Sulfolobus solfataricus

Strain: P2

Tilt Series Settings: Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Ų, defocus: -10.0 μm, magnification: 22500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: With Jamie Snyder at MSU, Montana.

Sample Preparation: S. solfataricus strain P2 cultures were infected with STIV as previously described (Ortmann et al., 2006). Sulfolobus were grown up from glycerol stock in media 182 (pH 3.5), 80°C and passage once. The cultures were passed second time to media 182 (pH 2.5) and infected with STIV at MOI ~10 at OD 650 nm ~0.4. At 24 hour Post infection, cells were concentrated ~20 fold by centrifugation.

rra2014-01-07-32_slicer10562.jpg: Intra pyramidal body- STIV

Attached Files

stiv24h0021.mrc, Tilt Series (Pixel Size 0.48 nm), 3.2 GB

stiv24h0021_full.rec, Reconstruction (Pixel Size 1.92 nm), 623.6 MB

Files

keyimg_rra2014-01-07-32.jpg

Files (3.8 GB)

Name Size
md5:5e749e85a5a5d2d662d9f1b385662b73
1.1 MB Preview Download
md5:b99fdc67b5500ee32ef74ce66cd69d00
19.4 MB Preview Download
md5:3a250cafa12a4022ac6feede1f7e11c1
212.0 kB Preview Download
3.2 GB (external) Download
623.6 MB (external) Download

Additional details

Identifiers

DOI
10.22002/srb9r-bka88
TILT_SERIES_ID
rra2014-01-07-32

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2014-01-07
Created
2014-01-08
Updated
2014-11-07