Published 2013 | Version v1
Dataset Open

Hylemonella + Bdellovibrio

Creators

  • 1. ROR icon California Institute of Technology

Description

Raw data files of Hylemonella + Bdellovibrio

Technical info

Tilt Series Date: 2013-01-03

Data Taken By: Yi-Wei Chang

Species / Specimen: Hylemonella gracilis

Strain: ATCC 19624

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 100.0 eV/Ų, defocus: -10.0 μm, magnification: 27500x.

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: UCSFTomo

Purification / Growth Conditions / Treatment: Hylemonella grown 48 hr in Broth 233 at 26°C without antibiotics, Final OD600 < 0.1, incubated with attack-phase Bdellovibrio for 3 days, Spun down by 1000 rcf for 5 min and concentrated by ~10x for plunge freezing

Sample Preparation: Vitrobot setting: 100% humidity, 4 ul sample, 10 nm BSA treated gold, -3 offset, 4 s blot time, no drain, ethane/propane mix

ycw2013-01-03-17_slicer5732.jpg: chemoreceptor ycw2013-01-03-17_slicer5733.jpg: filaments ycw2013-01-03-17_slicer5735.jpg: membrane irregularity ycw2013-01-03-17_slicer5743.jpg: flagellar motor? . chemoreceptor connection?

Attached Files

Bdel_Hyle_0020005.mrc, Tilt Series (Pixel Size 0.4 nm), 2.3 GB

Bdel_Hyle_0020005_full.rec, Reconstruction (Pixel Size 1.6 nm), 441.7 MB

Files

keyimg_ycw2013-01-03-17.jpg

Files (2.8 GB)

Name Size
2.3 GB (external) Download
441.7 MB (external) Download
md5:d20d1b4c6fafbe7fdc7d959bb7c8552f
1.1 MB Preview Download
md5:5f6277ff54f0da001a4b823fab40b9eb
18.8 MB Preview Download
md5:6e7691f2afc38df6aa859bec872f9eb1
433.7 kB Preview Download
md5:6d8767387a9ed0b077adb1e92f52f6d9
441.8 kB Preview Download
md5:ed32734efe118b6c6d0a925935c1c72e
443.9 kB Preview Download
md5:49e5a44ea6202292c637bff52c9c4ef0
286.9 kB Preview Download

Additional details

Identifiers

DOI
10.22002/v9ejf-p8g71
TILT_SERIES_ID
ycw2013-01-03-17

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2013-01-03
Created
2013-01-04
Updated
2014-07-10