Published 2013 | Version v1
Dataset Open

Hylemonella + Bdellovibrio

Creators

  • 1. ROR icon California Institute of Technology

Description

Raw data files of Hylemonella + Bdellovibrio

Technical info

Tilt Series Date: 2013-01-03

Data Taken By: Yi-Wei Chang

Species / Specimen: Hylemonella gracilis

Strain: ATCC 19624

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 100.0 eV/Ų, defocus: -10.0 μm, magnification: 27500x.

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: UCSFTomo

Purification / Growth Conditions / Treatment: Hylemonella grown 48 hr in Broth 233 at 26°C without antibiotics, Final OD600 < 0.1, incubated with attack-phase Bdellovibrio for 3 days, Spun down by 1000 rcf for 5 min and concentrated by ~10x for plunge freezing

Sample Preparation: Vitrobot setting: 100% humidity, 4 ul sample, 10 nm BSA treated gold, -3 offset, 4 s blot time, no drain, ethane/propane mix

ycw2013-01-03-16_slicer5719.jpg: REZ ycw2013-01-03-16_slicer5720.jpg: membrane irregularity ycw2013-01-03-16_slicer5724.jpg: flagellar motor

Attached Files

Bdel_Hyle_0020004.mrc, Tilt Series (Pixel Size 0.4 nm), 2.3 GB

Bdel_Hyle_0020004_full.rec, Reconstruction (Pixel Size 1.6 nm), 441.7 MB

Files

keyimg_ycw2013-01-03-16.jpg

Files (2.8 GB)

Name Size
2.3 GB (external) Download
441.7 MB (external) Download
md5:7229c7da1551150a033ccc36d742952c
1.1 MB Preview Download
md5:86c8f27d38c9be39ce9f0c1ca89050c8
17.7 MB Preview Download
md5:04fabfecc755a4eddb7705c83078f0f7
390.9 kB Preview Download
md5:6fc6e67cd1eae98246392c2151a9fbab
391.0 kB Preview Download
md5:a8c26ffdeb4c06afaf5ec23217f678e4
269.1 kB Preview Download

Additional details

Identifiers

DOI
10.22002/wd3mj-mj441
TILT_SERIES_ID
ycw2013-01-03-16

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2013-01-03
Created
2013-01-04
Updated
2014-07-10